Pairwise Alignments

Query, 590 a.a., polysaccharide deacetylase from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., Uncharacterized protein YadE from Escherichia coli ECRC62

 Score = 68.6 bits (166), Expect = 5e-16
 Identities = 61/249 (24%), Positives = 109/249 (43%), Gaps = 27/249 (10%)

Query: 347 VPIIMYHRFIRDDSEKGVH--GTYLHVQQLEKHFQLLKKMGFETLTFKDLSEKGFI-HRL 403
           +P++ YH  +RD+         T   V+        L+  G+ TL+   L  +G++ +++
Sbjct: 170 LPVLTYHHILRDEENTRFRHTSTTTSVRAFNNQMAWLRDRGYATLSMAQL--EGYVKNKI 227

Query: 404 QPGKRFIIITVDDGYRDNYDLLLPLLKKYQFKAVVYVVTG---ENFNRWDVEVSDNPEKV 460
               R ++IT DDG +       P+LK+Y  KA  +VVT     +  +W      NP K 
Sbjct: 228 NLPARAVVITFDDGLKSVSRYAYPVLKQYGMKATAFVVTSRIKRHPQKW------NP-KS 280

Query: 461 VPLMSPEQVKALHDSGLVEIGGHT--------MTHPFLSKLSESEQREEILRNKLELEAL 512
           +  MS  ++  + D  +++   HT           P L   SE     +  R++  L A 
Sbjct: 281 LQFMSVSELNEIRD--VLDFQSHTHFLHRVDGYRRPILLSRSEHNILFDFARSRRAL-AQ 337

Query: 513 IGEPLTSFAYPYGDHDATSKQLAQDLGYPFAVATNSGPLLMHQDPYQIRRIAIFPRTDTF 572
               +   +YP+G  +  + + A D G+  AV T  G +    +P  ++R+ I  RTD+ 
Sbjct: 338 FNPHVWYLSYPFGGFNDKAVKAANDAGFHLAVTTMKGKVKPGDNPLLLKRLYIL-RTDSL 396

Query: 573 GLWRKVKGN 581
               ++  N
Sbjct: 397 ETMSRLVSN 405