Pairwise Alignments

Query, 590 a.a., polysaccharide deacetylase from Vibrio cholerae E7946 ATCC 55056

Subject, 310 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score = 57.0 bits (136), Expect = 1e-12
 Identities = 47/190 (24%), Positives = 78/190 (41%), Gaps = 33/190 (17%)

Query: 410 IIITVDDGYRDNYDLLLPLLKKYQFKAVVY----VVTGENFNRWDVEVSDN--PEKVVPL 463
           ++IT DDG+R+N   L PL +++  +  +Y    +V       W    +D    E++  +
Sbjct: 76  LVITFDDGHRNN-TALAPLFREFDLRPTIYLCSQIVGTARPYWWKTAAADGIGVERLKRV 134

Query: 464 MSPEQVKALHDSG-----------------------LVEIGGHTMTHPFLSKLSESEQRE 500
             PE+ + L ++G                       + + G HT THP L +  +    +
Sbjct: 135 SDPERRRLLAEAGNDPDKDGDDRQAMTWDEIARMTDVADYGAHTRTHPILLQCDDDRCSD 194

Query: 501 EILRNKLELEALIGEPLTSFAYPYGDHDATSKQLAQDLGYPFAVATNSGPLLMHQDPYQI 560
           EI   + ELE  +G     FA+P GD      +  +  GY  A   + G      DP   
Sbjct: 195 EIALCRAELEEALGRSCRHFAFPNGDFSDREVEEIRRAGYRTARTIDPGFNDASTDPL-- 252

Query: 561 RRIAIFPRTD 570
            R+  FP +D
Sbjct: 253 -RLKAFPVSD 261