Pairwise Alignments

Query, 590 a.a., polysaccharide deacetylase from Vibrio cholerae E7946 ATCC 55056

Subject, 350 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score = 45.8 bits (107), Expect = 3e-09
 Identities = 51/230 (22%), Positives = 89/230 (38%), Gaps = 30/230 (13%)

Query: 349 IIMYHRFIRDDSEKGVHGTYLHVQQLEKHFQLLKKMGFETLTFKDLSEKGFIHRLQPGK- 407
           +  Y RF  D +        + + Q E H   L    +  L    +     +  L+ GK 
Sbjct: 42  VFAYDRFGEDQNPS----ISIRIDQFEAHLDELTDGDYTVLPLPKI-----LDALRTGKP 92

Query: 408 ---RFIIITVDDGYRDNYDLLLPLLKKYQFKAVVYVVTGENFNRWDVEVSDNPEKVVPL- 463
              R + IT+D+  R  +    P LK       ++V T            D  ++  P  
Sbjct: 93  LPDRTVAITIDEASRSAFTEAWPRLKAANLPFTLFVAT------------DAVDRGSPAH 140

Query: 464 MSPEQVKALHDSGLVEIGGHTMTHPFLSKLSESEQREEILRNKLELEALIGEPLTSFAYP 523
           M+  +++ L  +G+      T T   L++ S  +   ++ R     +A +G      AYP
Sbjct: 141 MTWGEIRQLAAAGVTIGALGTSTQSMLAR-SPDQLAADLRRMSDRFQAELGRRPAVLAYP 199

Query: 524 YGDHDATSKQLAQDLGYPFAVATNSGPLLMHQDPYQIRRIAIFPRTDTFG 573
            G++    +Q+  D G+  A    SG L    DP+ + R   F   +T+G
Sbjct: 200 QGEYSLAVRQMVIDQGFTAAFGQQSGVLHPQADPWSLPR---FVMNETYG 246