Pairwise Alignments

Query, 590 a.a., polysaccharide deacetylase from Vibrio cholerae E7946 ATCC 55056

Subject, 747 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score = 62.0 bits (149), Expect = 8e-14
 Identities = 55/238 (23%), Positives = 92/238 (38%), Gaps = 71/238 (29%)

Query: 407 KRFIIITVDDGYRDNYDLLLPLLKKYQFKAVVYVVTG----------------------- 443
           + F   T+DDGYR+N +   P+ +KY     +++  G                       
Sbjct: 498 RSFCAFTLDDGYRNNAEHAAPIFRKYAVPYTIFITPGFVERSRSVWWETAAALTKKVTSF 557

Query: 444 --------------------ENFNRWDVEVSDNPEK--------------VVPL------ 463
                               E F R +  V ++PE               + P+      
Sbjct: 558 EFDFGAGPEQVECATPSQKVEAFARLENFVQESPEDEAVERIDRVARQHGIDPIAIVDDL 617

Query: 464 -MSPEQVKALHDSGLVEIGGHTMTHPFLSKLSESEQREEILRNKLELEALIGEPLTSFAY 522
            M   +++ L +  LV  G HTMTH  + K+  +    EI  +   +EA +G+   SF+Y
Sbjct: 618 VMDAAELRTLSNDPLVHFGAHTMTHVNMRKIDATRLVHEIEESTRRVEAYVGQRPQSFSY 677

Query: 523 PYGDHDATSKQLAQ---DLGYPFAVATNSGPLLMHQDPYQIRRIAIFPRTDTFGLWRK 577
           PYG   A  ++ A+   + G+  AV T +G L     P+ + + A  PR    G ++K
Sbjct: 678 PYGWVRAVGEREAKAVSEAGFSVAVTTQAGVL----GPHSLEKPAQLPRVSLNGRFQK 731