Pairwise Alignments

Query, 590 a.a., polysaccharide deacetylase from Vibrio cholerae E7946 ATCC 55056

Subject, 382 a.a., glycosyltransferase from Agrobacterium fabrum C58

 Score = 48.5 bits (114), Expect = 5e-10
 Identities = 56/235 (23%), Positives = 103/235 (43%), Gaps = 48/235 (20%)

Query: 65  VAYLVYLIKKHQIQLVHAHSRASSWSCHIACRLTNTPMVTTVHGRQPVHVSRKKFHAMGD 124
           VA+ +    KH   ++ A+S+ + + C +A +L+  P+V  +H      V+   F A   
Sbjct: 83  VAWQLSREAKH-FDVICANSQKALFVCALAAKLSRRPLVWILHDI----VTDTAFSATNR 137

Query: 125 KALPVCEAIREQLIKDLNVPES------------QLHVSRNGIETSIFK----------R 162
           +A      I  +L+  +N  E+            ++ +  NG + +  K          R
Sbjct: 138 RASLAFARIFARLVA-VNSEETGRAFIEAGGEADKVRIVYNGFDPAKAKLHDAGMAARLR 196

Query: 163 SAAPNNPKPVISIIGRLSGPKGELCYRLLTECLDLDRYQVQVITGTPL-TERFSA----- 216
           +     P+P++ + GRLS  KG+  +  L     ++  Q  ++ G     E + A     
Sbjct: 197 AELGLGPQPLVGLFGRLSEWKGQHVF--LDALAAMEGVQAVIVGGALFGQEAYEARIREQ 254

Query: 217 -----LQDKVSFPGYSANVEQIMAQSDLVIGA-------GRVAMEALLCGRPTLA 259
                L  +V F G+ ++V ++MA  D+V          GRV +EA++CGRP +A
Sbjct: 255 ASRLGLDGRVRFLGFRSDVPELMASMDVVAHTSIVAEPFGRVVVEAMMCGRPVVA 309