Pairwise Alignments

Query, 399 a.a., polymerase from Vibrio cholerae E7946 ATCC 55056

Subject, 417 a.a., O-antigen ligase family protein from Rhodanobacter sp000427505 FW510-R12

 Score = 57.8 bits (138), Expect = 6e-13
 Identities = 53/260 (20%), Positives = 117/260 (45%), Gaps = 18/260 (6%)

Query: 121 AFAFYQFFILNMPRVDGF----LFSINFGYLAAALAILSF--GLSFTQTRFKYYLYLS-V 173
           A + YQ + L + R  G       ++ F      L +L+    L    +R + +L+++ V
Sbjct: 125 AASLYQRYALGVDRPYGLNGGDWAAVEFAMYLLVLVLLAMLQALRPGTSRGERWLHIAAV 184

Query: 174 VAATVATILTLTRGAILTLLFVFI---LFFIVNVRKIKFKQTLVFTLISFLLVSVSYQFS 230
           V      +LT +RG +L+   V++   L++ +  R  + +  L+F +    +++V+    
Sbjct: 185 VVGLYGAVLTQSRGPLLSFAPVYLGLMLWYAMRSRHWR-RVLLLFAVTVIGMLAVTATLH 243

Query: 231 PRIQERVDFTIFEISSIASNNIHAAASS-GGRLQLWYAAVEAFKHNPIWGTTYSERESLN 289
             + ER+     +I+S  +      A++ G RL++W  A +AF+ +P+ G    +     
Sbjct: 244 REMVERLTAVPVQIASFGNGGSDGGATAVGERLEMWRTAWQAFREHPLAGIGLDQ---FG 300

Query: 290 IELFKEGKVDEWTSTVPRG-HAHSQYFEAIASNGTLGILAIFAMLILPFGVFLNDYRKTG 348
           + + ++  + + +  + +  H HS+Y E++ + G   +L +   L +P G F        
Sbjct: 301 VRVREQVAIGQASPLIAKYVHPHSEYLESMVAGGLPALLVLLLFLAVPLGFFARHLGHPQ 360

Query: 349 SPISQTGY--LFAFGFIIFC 366
            P++      +   G  + C
Sbjct: 361 EPVAAAAAAGVMVIGMYVLC 380