Pairwise Alignments

Query, 399 a.a., polymerase from Vibrio cholerae E7946 ATCC 55056

Subject, 419 a.a., O-antigen ligase (NCBI) from Escherichia coli BW25113

 Score = 55.5 bits (132), Expect = 3e-12
 Identities = 56/243 (23%), Positives = 104/243 (42%), Gaps = 14/243 (5%)

Query: 112 TILASFGALAF--AFYQFFILNMPRVDGFLFSINFGYLAAALAIL-----SFGLSFTQTR 164
           ++L +  +L+F  A Y  +I ++   D   F +     AA   +L        + +T+  
Sbjct: 134 SVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKN 193

Query: 165 FKYYLYLSVVAATVATILTLTRGAILTLLFVFILFFIVNVRKIKFKQTLVFTLISFLLVS 224
             +   L+  A      LT TR  +L    + +   I    K   K T    L+  +L S
Sbjct: 194 HPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILAS 253

Query: 225 VSYQFSPRIQERVDFTIFEISSIASNNIHAAASSGGRLQLWYAAVEAFKHNPI-WGTTYS 283
           +   F+  IQ R +  + +++S    N ++  S G RL ++   +  F  +P  + +  S
Sbjct: 254 IVIIFNKPIQNRYNEALNDLNSYT--NANSVTSLGARLAMYEIGLNIFIKSPFSFRSAES 311

Query: 284 ERESLNIELFKEGKVDEWTSTVPRGHAHSQYFEAIASNGTLGILAIFAMLILPFGVFLND 343
             ES+N+ + +  ++          H H++  EA +  G +GI   F+ L L F +F   
Sbjct: 312 RAESMNLLVAEHNRL-RGALEFSNVHLHNEIIEAGSLKGLMGI---FSTLFLYFSLFYIA 367

Query: 344 YRK 346
           Y+K
Sbjct: 368 YKK 370