Pairwise Alignments

Query, 399 a.a., polymerase from Vibrio cholerae E7946 ATCC 55056

Subject, 417 a.a., O-antigen ligase domain-containing protein from Escherichia coli ECRC62

 Score = 48.1 bits (113), Expect = 5e-10
 Identities = 68/320 (21%), Positives = 134/320 (41%), Gaps = 36/320 (11%)

Query: 90  MYFFIKNEISKGANLDNTLCTSTILASFGALAFAFYQFFILNMPRV---------DGFLF 140
           +  F KNE+         +  +++       A A +Q F LN+ RV          G++ 
Sbjct: 112 LVLFAKNEMRTKIKFGKLILFASLATQLLFFAHAMWQHFYLNVDRVALSASHATTAGYI- 170

Query: 141 SINFGYLAAALAILSFGLSFTQTRFKYYLYLSVVAATVATILTLTRGAILTLLFVFILFF 200
            I F  L A++ IL   L    T +     LS+     A I+T TR AIL   F  ++  
Sbjct: 171 -ILFPSLLASILILKSDLRHKTTLYTINFMLSL----CAVIVTETRAAILVFPFFALILI 225

Query: 201 IVNV---RKIKFKQTLVFTLISFLLVSVSYQFSPRIQERVDFTIFEISSIASNNIHAAAS 257
           +++    ++I +K   ++  I+  L++  + F   +  R++    ++ + + +N     S
Sbjct: 226 VMDSYINKRINYK---LYCFITIALLAGVFSFKDTLLMRMNDLNNDLVNYSHDN--TRTS 280

Query: 258 SGGRLQLWYAAVEAFKHNPIWGTTYSERESLNIELFKEGKVDEWTSTVP--RGHAHSQYF 315
            G RL ++   ++ +  +PI G +  +R     EL  E K    +  +P    H H+   
Sbjct: 281 VGARLAMYEVGLKTY--SPI-GQSLEKRAEKIHEL--EEKEPRLSGALPYVDSHLHNDLI 335

Query: 316 EAIASNGTLGILAIFAMLILPFGVFLNDYRKTGSPISQTGYLFAFGFIIFCLTEAPLQAN 375
           + +++ G  G++    + IL F   L    +T         +  F  ++  L++  L + 
Sbjct: 336 DTLSTRGIPGVV----LTILAFSAILIYALRTAK--EPYILILLFSLLVVGLSDVILFSK 389

Query: 376 LIGTFYGFMVAIFYAYIAAK 395
            + T     + +  AY  A+
Sbjct: 390 PVPTAVFITIILLCAYFKAQ 409