Pairwise Alignments

Query, 346 a.a., lipopolysaccharide heptosyltransferase II from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., ADP-heptose--LPS heptosyltransferase from Pseudomonas simiae WCS417

 Score =  373 bits (958), Expect = e-108
 Identities = 188/343 (54%), Positives = 236/343 (68%), Gaps = 6/343 (1%)

Query: 2   MKILVIGPSWVGDMVMSQSLYQRLKQQHPDAQIDVLAPAWCKPILERMPEVNQAIEMTIG 61
           M IL++GPSWVGDMVM+Q+L+Q L+ ++PD QIDVLAP W +PILERMPEV +A+   +G
Sbjct: 1   MNILIVGPSWVGDMVMAQTLFQCLRMRYPDCQIDVLAPEWSRPILERMPEVRKALSFPLG 60

Query: 62  HGAFNLLGRRAIGCELRDNRYTHAIVLPNSAKSALIPWFANIPKRTGWKGEFRYGLLNDL 121
           HGA  L  RR IG  L    Y  AI+LPNS KS L+P+FA IPKRTGW+GEFRY LLND+
Sbjct: 61  HGALELATRRRIGKSLA-GEYDQAILLPNSLKSTLVPYFAGIPKRTGWRGEFRYVLLNDV 119

Query: 122 RP-DKRVFQYMVERYVALAHPKATMLADVSLEHCPRPKLVIDAIVQQAARQRLSLVSSRP 180
           R  DK  +  M+ER++ALA+     L        PRP L ID + + AA  +  L   RP
Sbjct: 120 RTLDKARYPLMIERFMALAYEPGAELPTPY----PRPSLQIDPVSRDAALAKFGLTLDRP 175

Query: 181 VIGLCPGAEFGPAKRWPDHYYAEVARYAIEQGFQVWLFGSAKDHSVTTQIQQALSEEQRE 240
           V+ LCPGAEFG +KRWP  +YA+VA   I +G+QVWLFGS KDH V   I+Q L    RE
Sbjct: 176 VLALCPGAEFGESKRWPSEHYAKVAEAKIREGWQVWLFGSKKDHPVGEDIRQRLIPGLRE 235

Query: 241 YCANLAGETSLIEAVDLLAACHTVVSNDSGLMHVSAAVGCNIVAIYGSSSPKYTPPLTDK 300
              NL+G+TSL EA+DLL+   +VVSNDSGLMHV+AA+   +VA+YGS+SP +TPPL DK
Sbjct: 236 EAVNLSGDTSLAEAIDLLSCADSVVSNDSGLMHVAAALNRPLVAVYGSTSPGFTPPLADK 295

Query: 301 LAVVHTEIECRPCFKRVCPLEHLNCLNQLKPAQVIKALDKFIG 343
           + VV   +EC PCF R C   H NC+ QL P  V +AL +  G
Sbjct: 296 VEVVRLGLECSPCFDRTCRFGHYNCMRQLLPQPVNEALQRLQG 338