Pairwise Alignments

Query, 349 a.a., lipopolysaccharide biosynthesis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., Lipopolysaccharide heptosyltransferase 1 from Xanthobacter sp. DMC5

 Score = 42.0 bits (97), Expect = 2e-08
 Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 5/147 (3%)

Query: 158 PEVECMLDML-KILGHNPSYPL-DFAYPDNRQICDHAAPYIVYFSGASQLRKILTKPEMR 215
           PEVE M+  L K+      Y L D       +     APY+V+  G +   K  T    R
Sbjct: 134 PEVEHMVVRLRKLFAAALGYRLHDLPADTGLRPAPGGAPYLVFLHGTTWPTKTWTLDGWR 193

Query: 216 AVIEQTIQQQPNVKHVFLEGKNEFEKGEYLQDLADNGSLTIQPCLPLDDLVTFIAKATLV 275
           A+     +    V+ +F  G  E  + + +    DN  + + P   L+ L   IA A  V
Sbjct: 194 ALAGLAGEAGVEVR-LFAHGTEERARADAIAAGQDN--VRLLPPQGLEGLAPQIAGAAGV 250

Query: 276 IAPDTGIRNVAISTHTPTVGIFYATVP 302
           +  DTG+ ++A +   PTVG++  T P
Sbjct: 251 VTVDTGLGHLAAAYGVPTVGLYGPTNP 277