Pairwise Alignments

Query, 349 a.a., lipopolysaccharide biosynthesis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 353 a.a., ADP-heptose--LPS heptosyltransferase from Pseudomonas simiae WCS417

 Score = 43.1 bits (100), Expect = 1e-08
 Identities = 61/285 (21%), Positives = 112/285 (39%), Gaps = 17/285 (5%)

Query: 31  KTAVIRHAALGDQVIVRPFLVEARKFFPNAEITLVTVSNYL-YGTPSDLADKTV---IMK 86
           +  VI+ ++LGD +   P L +A +  P      V    +    T     DK +   I +
Sbjct: 2   RVLVIKTSSLGDVIHALPALTDAARAIPGIRFDWVVEEGFAEIPTWHPAVDKVIPVAIRR 61

Query: 87  SRDDSKQLSLRQKWQDYNQLEAQ---DIIFDVAGTNRSYWMTLLTKAKLKVGFPYKPF-- 141
            R +  Q     +W+ + Q       D++ D  G  +S W+T   +A +  GF       
Sbjct: 62  WRKNIWQTIKSGEWRRFKQQVQSTKYDLVIDAQGLLKSAWLTRYVRAPI-AGFDKNSARE 120

Query: 142 -LCGTLYNLAVFRSDFQPEVECMLDMLKI-LGHN-PSYPLDFAYPDNRQI-CDHAAPYIV 197
            +    Y+  +  +  Q  VE +  +  + LG++ P    D+     + +      P+++
Sbjct: 121 PMAARFYSRRLAVARGQHAVERLRQLFAVALGYDLPKGLGDYGLSTEKLLGLPPKKPFVL 180

Query: 198 YFSGASQLRKILTKPEMRAVIEQTIQQQPNVKHVFLEGKNEFEKGEYLQDLADNGSLTIQ 257
              G +   K   +   R + E+  +    VK   L   N  EK    +         + 
Sbjct: 181 LLHGTTWDTKHWPEAYWRELAERMGRLGVEVK---LPWGNAAEKARAERLAQGLQHAEVL 237

Query: 258 PCLPLDDLVTFIAKATLVIAPDTGIRNVAISTHTPTVGIFYATVP 302
           P L L  +   +A A   +A DTG+ ++A +   PT+ +F  T P
Sbjct: 238 PKLNLAGVARVLASARACVAVDTGLGHLAAALDVPTISLFGPTNP 282