Pairwise Alignments

Query, 349 a.a., lipopolysaccharide biosynthesis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 357 a.a., ADP-heptose--LPS heptosyltransferase I from Vibrio cholerae E7946 ATCC 55056

 Score = 56.6 bits (135), Expect = 1e-12
 Identities = 76/293 (25%), Positives = 124/293 (42%), Gaps = 17/293 (5%)

Query: 34  VIRHAALGDQVIVRPFLVEARKFFPNAEITLVTVSNYLYGTPSDLADKTVIMKSRDDSKQ 93
           ++R +A+GD       +   ++ +P   IT VT           L D  VI+      K+
Sbjct: 15  ILRLSAIGDVCNTIAAVQAIQRQWPQTRITWVT-GKLEAELIQSLPDIQVIVFD----KK 69

Query: 94  LSLRQKWQDYNQLEAQ--DIIFDVAGTNRSYWMTLLTKAKLKVGFPYKPFLCGTLY--NL 149
           L  R   Q + QL+++  D +  +    R+   TL  KA+ K+GF          +  N+
Sbjct: 70  LGWRAYTQLWQQLKSERFDALLHMQYAFRASIATLGIKARYKLGFDAARSQDFQTWFTNV 129

Query: 150 AVFRSDFQPEVECMLDMLKILGHN---PSYPLDFAYPDNRQICDHA----APYIVYFSGA 202
            V   D    ++ +L  ++ LG     P + L    PD+    +       P +V   GA
Sbjct: 130 KVPSPDKMHVLDGLLAFVEHLGIRDIEPKWSLT-CQPDDLTWAEAQFQPEQPRLVVVPGA 188

Query: 203 SQLRKILTKPEMRAVIEQTIQQQPNVKHVFLEGKNEFEKGEYLQDLADNGSLTIQPCLPL 262
           S+  K  T     AVIE   QQ   V       + E +    ++    +  L +     L
Sbjct: 189 SKAYKNWTAEGYAAVIEHAQQQGWQVILAGSPAQVERDLAAQVEQALAHPVLNLVGKSTL 248

Query: 263 DDLVTFIAKATLVIAPDTGIRNVAISTHTPTVGIFYATVPFRYTPLYEAHTIV 315
             ++  +AKA LVIAPDTG  ++A + HTP +G++    P R  P +  H +V
Sbjct: 249 QQMLALLAKADLVIAPDTGPAHMANAMHTPIIGLYAHHNPERTGPYHYRHYVV 301