Pairwise Alignments

Query, 439 a.a., 3-deoxy-D-manno-octulosonic acid transferase from Vibrio cholerae E7946 ATCC 55056

Subject, 676 a.a., Lipid IVA 3-deoxy-D-manno-octulosonic acid transferase (EC 2.4.99.12) [often with (EC 2.4.99.13) also] from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  220 bits (560), Expect = 1e-61
 Identities = 144/418 (34%), Positives = 213/418 (50%), Gaps = 10/418 (2%)

Query: 13  IMLLRTLYTLLLTLAAPFLLYGLYRRRQGKPSVGKRWKEHFGITPPLKTTTPPIWIHAAS 72
           + L    Y LL    A  LL  L+ R + +P   +  +   G  P        IW+HAAS
Sbjct: 11  VSLPHRAYRLLSRALAAPLLGWLWWRGRREPGYRQNLRHRLGFIPVDPEQLGCIWVHAAS 70

Query: 73  VGETLAVTPLIKQIKQRSPNTPILLTTTTPTGAEQAEK-LADWVEHRYTPIDFSFAVRGF 131
           VGE  A+ PL+  + +  P   ++++T TPTGA   +    D + H Y PID   AV  F
Sbjct: 71  VGEVQAMQPLLHALLEEWPAHAVVVSTQTPTGARALQAHWGDQIRHVYAPIDTPGAVARF 130

Query: 132 LRRVRPCQLIIVETELWPNTLHTVAKAGLPITLVNARLSEKSYRGYQRIHPFFNSMAKPL 191
           L R++P  LI+VE ELWP  L       +P+ LVNARLSE S R Y+R       +   L
Sbjct: 131 LNRLQPRLLILVERELWPEWLLQCRAHAIPVALVNARLSEGSARTYRRWPGLMRPVWPQL 190

Query: 192 SLVLCQFADDAQRFIQLGVAETKIKITGSIKFDINITYEVIAQGEALRTALGKHRPVWIA 251
           ++     A  AQR  +LGV   ++  TG++KFD+ +    +A    L     + R + +A
Sbjct: 191 TVAAADTA-SAQRLRELGVPPARLHETGNLKFDVAVPAARVALPPEL-----QERTLVVA 244

Query: 252 ASTHQGEDEIVLAAHQEILKQHPNALLILVPRHPERFAAV-HKLAASLFSVQTRSSQQTI 310
            STH+G++   LA  +E+   +P+ LL+LVPRHP+RF  V   L  S  +   RSS Q +
Sbjct: 245 GSTHEGDEVAWLAIWRELAPVNPSWLLVLVPRHPQRFDEVADHLQHSGLAFVRRSSGQVV 304

Query: 311 TSDTQVYLGDTMGEMLVLLGASDVCFMGGSLVGKKVGGHNLLEPAALAKPIVTGPSFYNF 370
              TQV L D MGE++     + +CF+GG+L    VGGHN LEP ++ +P++ GP  +N 
Sbjct: 305 APGTQVLLVDAMGELMHWYQHASLCFVGGTLA--PVGGHNPLEPMSVGQPVLFGPHVHNA 362

Query: 371 TDITHALINAHACVIADQPETIAKQVNHWFSDAQERQQCGKNALAIVMQNRGALENTL 428
             +   +  + A         +A  V  W    +  Q+    A  ++ +NRGA   TL
Sbjct: 363 APLFEEIARSGAGECVRSARELAAAVQRWLVQPETWQRRADAARELIARNRGASARTL 420