Pairwise Alignments

Query, 439 a.a., 3-deoxy-D-manno-octulosonic acid transferase from Vibrio cholerae E7946 ATCC 55056

Subject, 403 a.a., Lipid IVA 3-deoxy-D-manno-octulosonic acid transferase (EC 2.4.99.12) [often with (EC 2.4.99.13) also] from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  320 bits (819), Expect = 7e-92
 Identities = 169/394 (42%), Positives = 250/394 (63%), Gaps = 7/394 (1%)

Query: 38  RRQGKPSVGKRWKEHFGI-TPPLKTTTPPIWIHAASVGETLAVTPLIKQIKQRSPNTPIL 96
           R +  P+  KRW E +G    PLK     I +H+ SVGETLA  PL++ ++ R P+ PI 
Sbjct: 2   RGRKAPAYRKRWGERYGFYRRPLKPGG--IMLHSVSVGETLAAIPLVRALRHRYPDLPIT 59

Query: 97  LTTTTPTGAEQAEK-LADWVEHRYTPIDFSFAVRGFLRRVRPCQLIIVETELWPNTLHTV 155
           +TT TPTG+E+ +    + V+H Y P D   A+  FL ++ P  ++I+ETELWPN +  +
Sbjct: 60  VTTMTPTGSERVQSAFGNDVQHVYLPYDLPDALNRFLNKIDPKLVLIMETELWPNLIAAL 119

Query: 156 AKAGLPITLVNARLSEKSYRGYQRIHPFFNSMAKPLSLVLCQFADDAQRFIQLGVAETKI 215
            K  +P+ + NARLS +S  GY ++  F  ++ + ++L+  Q  +D +RF+ LG    ++
Sbjct: 120 HKRHIPLVIANARLSARSAAGYAKLGKFVRTLLRRITLIAAQNEEDGERFVALGAKNNQV 179

Query: 216 KITGSIKFDINITYEVIAQGEALRTALGKHRPVWIAASTHQGEDEIVLAAHQEILKQHPN 275
            +TGS+KFDI++T ++ A+   LR     HRPVWIA STH GE+ IV+AAHQ +L Q PN
Sbjct: 180 TVTGSLKFDISVTPQLAAKAVTLRRQWAPHRPVWIATSTHDGEESIVIAAHQALLHQFPN 239

Query: 276 ALLILVPRHPERFA-AVHKLAASLFSVQTRSSQQTITSDTQVYLGDTMGEMLVLLGASDV 334
            LLILVPRHPERF  A++ +  +  S  TRSS +  ++ TQV +GDTMGE+++L G +D+
Sbjct: 240 LLLILVPRHPERFPDAINLVRQAGLSYITRSSGEVPSASTQVVVGDTMGELMLLYGIADL 299

Query: 335 CFMGGSLVGKKVGGHNLLEPAALAKPIVTGPSFYNFTDITHALINAHACVIADQPETIAK 394
            F+GGSLV +  GGHN LE AA A P++ GP  +NF DI   L  A   +      T+AK
Sbjct: 300 AFVGGSLVER--GGHNPLEAAAHAIPVLMGPHTFNFKDICARLDQASGLITITDAATLAK 357

Query: 395 QVNHWFSDAQERQQCGKNALAIVMQNRGALENTL 428
           +V+   +DA  R   G++A+ ++ QN+GAL+  L
Sbjct: 358 EVSSLLTDADYRNFYGRHAVEVLYQNQGALQRLL 391