Pairwise Alignments

Query, 439 a.a., 3-deoxy-D-manno-octulosonic acid transferase from Vibrio cholerae E7946 ATCC 55056

Subject, 425 a.a., 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) from Escherichia coli BL21

 Score =  333 bits (853), Expect = 8e-96
 Identities = 178/417 (42%), Positives = 261/417 (62%), Gaps = 7/417 (1%)

Query: 15  LLRTLYTLLLTLAAPFLLYGLYRRRQGKPSVGKRWKEHFGI-TPPLKTTTPPIWIHAASV 73
           +L  LYT LL L  P +   L+ R +  P+  KRW E +G    PLK     I +H+ SV
Sbjct: 1   MLELLYTALLYLIQPLIWIRLWVRGRKAPAYRKRWGERYGFYRHPLKPGG--IMLHSVSV 58

Query: 74  GETLAVTPLIKQIKQRSPNTPILLTTTTPTGAEQAEK-LADWVEHRYTPIDFSFAVRGFL 132
           GETLA  PL++ ++ R P+ PI +TT TPTG+E+ +      V+H Y P D   A+  FL
Sbjct: 59  GETLAAIPLVRALRHRYPDLPITVTTMTPTGSERVQSAFGKDVQHVYLPYDLPDALNRFL 118

Query: 133 RRVRPCQLIIVETELWPNTLHTVAKAGLPITLVNARLSEKSYRGYQRIHPFFNSMAKPLS 192
            +V P  ++I+ETELWPN +  + K  +P+ + NARLS +S  GY ++  F   + + ++
Sbjct: 119 NKVDPKLVLIMETELWPNLIAALHKRKIPLVIANARLSARSAAGYAKLGKFVRRLLRRIT 178

Query: 193 LVLCQFADDAQRFIQLGVAETKIKITGSIKFDINITYEVIAQGEALRTALGKHRPVWIAA 252
           L+  Q  +D  RF+ LG    ++ +TGS+KFDI++T ++ A+   LR     HRPVWIA 
Sbjct: 179 LIAAQNEEDGARFVSLGAKNNQVTVTGSLKFDISVTPQLAAKAVTLRRQWAPHRPVWIAT 238

Query: 253 STHQGEDEIVLAAHQEILKQHPNALLILVPRHPERFA-AVHKLAASLFSVQTRSSQQTIT 311
           STH+GE+ +V+AAHQ +L+Q PN LLILVPRHPERF  A++ +  +  S  TRSS +  +
Sbjct: 239 STHEGEESVVIAAHQALLQQFPNLLLILVPRHPERFPDAINLVRQAGLSYITRSSGEVPS 298

Query: 312 SDTQVYLGDTMGEMLVLLGASDVCFMGGSLVGKKVGGHNLLEPAALAKPIVTGPSFYNFT 371
           + TQV +GDTMGE+++L G +D+ F+GGSLV +  GGHN LE AA A P++ GP  +NF 
Sbjct: 299 TSTQVVVGDTMGELMLLYGIADLAFVGGSLVER--GGHNPLEAAAHAIPVLMGPHTFNFK 356

Query: 372 DITHALINAHACVIADQPETIAKQVNHWFSDAQERQQCGKNALAIVMQNRGALENTL 428
           DI   L  A   +      T+AK+V+   +DA  R   G++A+ ++ QN+GAL+  L
Sbjct: 357 DICARLEQASGLITVTDATTLAKEVSSLLTDADYRSFYGRHAVEVLYQNQGALQRLL 413