Pairwise Alignments

Query, 319 a.a., wavE lipopolysaccharide synthesis family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., LPS biosynthesis protein WavE from Vibrio cholerae E7946 ATCC 55056

 Score =  122 bits (305), Expect = 1e-32
 Identities = 90/287 (31%), Positives = 138/287 (48%), Gaps = 30/287 (10%)

Query: 4   DQITFVIQGPITPS--------ITSTSVRRLRSIFPGCQIIVSTWEGENTQDIEADLIIY 55
           + ITFV+QGP+  S        IT   +  +R  FP   II+STW+G+    ++ D ++ 
Sbjct: 7   EAITFVVQGPVQASASRQQIAGITEQCLNSIRRFFPKSTIILSTWKGQPLDGLDYDQVLE 66

Query: 56  NKDPGSTIFVYSKRNDAIPVNINRQIVSTVSGLRHVKTKFAAKLRADNILNKRRVLEIFE 115
             DPG+    Y      I +N NRQ+ ST  GL+ VKT +A KLR DN+L  R+ +E++E
Sbjct: 67  LDDPGANTVFYD--GQPIKLNNNRQMYSTHMGLKAVKTPYAVKLRTDNLLTGRQFVELYE 124

Query: 116 QFP--LRKEGYAVLNNRLVCSNYFAKEFERGLSVPFFFSDFFQFGEVEDLLKVWDCDLYS 173
           ++    R + Y  L  R++ S+ F      G  V F  SD F FG  +DLL +W      
Sbjct: 125 RYADLPRAQNYQFLTQRVLTSSTFFISSHYGHPVHFHKSDLFDFGLTQDLLTIWSDRWIP 184

Query: 174 DYDFKSTLSGKKQHKYYPNDSVNVEQKIWSNAARKLYPYE--LKDEHGDHFARQQSY--N 229
           +  F      K +H          EQ +  N    L   E  ++ +  DH    +++   
Sbjct: 185 ELHFTLKPGYKARHP-------ATEQVLCLNWISALLDEEHHIESKTCDHAGLGENFWPQ 237

Query: 230 FMINNLIIVDGDELGLDVPQRL--RHSNSYPYDFFTFQRWKWLYENE 274
           FM NNL++   + +GLDV +R   R + +  YD        WL+ N+
Sbjct: 238 FMANNLLMDCPENIGLDVTERFYKRGNLALEYDL-----KDWLHLNQ 279