Pairwise Alignments

Query, 357 a.a., ADP-heptose--LPS heptosyltransferase I from Vibrio cholerae E7946 ATCC 55056

Subject, 352 a.a., lipopolysaccharide core biosynthesis protein from Escherichia coli BL21

 Score = 79.3 bits (194), Expect = 1e-19
 Identities = 63/285 (22%), Positives = 140/285 (49%), Gaps = 18/285 (6%)

Query: 13  LCILRLSAIGDVCNTIAAVQAIQRQWPQTRITWVTGKLEAELIQSLPDIQVIVFDKKLGW 72
           + ++++   GD+  T   + ++++ +P  +I  +  +    ++   P+I  +   K    
Sbjct: 8   ILLIKMRFHGDMLLTTPVISSLKKNYPDAKIDVLLYQDTIPILSENPEINALYGIKNKKA 67

Query: 73  RA------YTQLWQQLKSERFDALLHMQYAFRASIATLGIKARYKLGFDAARSQD--FQT 124
           +A      +  L + L++ ++D ++++   +  +I    + AR K+  D    Q   ++ 
Sbjct: 68  KASEKIANFFHLIKVLRANKYDLIVNLTDQWMVAILVRLLNARVKISQDYHHRQSAFWRK 127

Query: 125 WFTNVKVPSPDKMHVLDGLLAFVEHLGIRDIEPKWSLTCQPDDLTWAEAQFQPE-----Q 179
            FT++ VP     +V++  L+ +  LG+  +  + +++  P   +W   + + +     Q
Sbjct: 128 SFTHL-VPLQGG-NVVESNLSVLTPLGLDSLVKQTTMSYPP--ASWKRMRRELDHAGVGQ 183

Query: 180 PRLVVVPGASKAYKNWTAEGYAAVIEHAQQQGWQVILAGSPAQVERDLAAQVEQAL-AHP 238
             +V+ P A + +K W    ++AVI+    +G++V+L   P + +     ++ Q     P
Sbjct: 184 NYVVIQPTARQIFKCWDNAKFSAVIDALHARGYEVVLTSGPDKDDLACVNEIAQGCQTPP 243

Query: 239 VLNLVGKSTLQQMLALLAKADLVIAPDTGPAHMANAMHTPIIGLY 283
           V  L GK T  ++ AL+  A L I  D+ PAH+A A++TP+I L+
Sbjct: 244 VTALAGKVTFPELGALIDHAQLFIGVDSAPAHIAAAVNTPLISLF 288