Pairwise Alignments

Query, 269 a.a., formamidopyrimidine-DNA glycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 275 a.a., bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase from Rhodanobacter sp000427505 FW510-R12

 Score =  289 bits (740), Expect = 4e-83
 Identities = 142/274 (51%), Positives = 192/274 (70%), Gaps = 6/274 (2%)

Query: 1   MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQELKQL-EGQTILAIHRRAKYL 59
           MPELPEVE +R GI+P++VG  +  + LR P LRWPIP E+  L  GQ I A+ RRAKYL
Sbjct: 1   MPELPEVETTRRGIAPYVVGRRVTGVTLRRPDLRWPIPPEITALLPGQRIDAVERRAKYL 60

Query: 60  IIETAVGSAIVHLGMSGSLRILDGDFPAAKHDHVDLVM--TSGKR---LRYNDPRRFGAW 114
           +++T  GSA++HLGM+G LR+L  D P  KHDHVD+ +  TS +    LR+ DPRRFG  
Sbjct: 61  LLQTQAGSALLHLGMTGVLRVLPPDAPVGKHDHVDIALERTSAQAPRILRFTDPRRFGCL 120

Query: 115 LWCAPDESHEVLGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGVGNIYANE 174
           LW  P   HE+L  LGPEPLT+AF+ + +  ++R +  AVK F+MDNA VVGVGNIYA+E
Sbjct: 121 LWQPPGTIHELLAGLGPEPLTDAFDGDLLWRRSRGRTAAVKLFLMDNAVVVGVGNIYASE 180

Query: 175 SLFTSRLHPLRPAHSLSLEEWQTLVANIKQVLQVAIKQGGTTLKDFTQSDGKPGYFAQEL 234
           +LF + + P +PA S+S   +  L A +K++L  AI++GGTTL+DF   DG PGYF +EL
Sbjct: 181 ALFRAGIDPRKPAGSVSRVRYARLAAEVKRLLAWAIERGGTTLRDFLAPDGAPGYFFREL 240

Query: 235 QVYGKAKQPCPHCGEPLCEQKIAQRNTFFCPQCQ 268
            VYG+  +PC  C  P+ +  + QR+TF+CP+CQ
Sbjct: 241 MVYGRTGEPCRTCATPIRQVTLGQRSTFWCPRCQ 274