Pairwise Alignments

Query, 269 a.a., formamidopyrimidine-DNA glycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 270 a.a., 5-hydroxymethyluracil DNA glycosylase from Pseudomonas simiae WCS417

 Score =  293 bits (749), Expect = 3e-84
 Identities = 145/269 (53%), Positives = 187/269 (69%), Gaps = 1/269 (0%)

Query: 1   MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQELK-QLEGQTILAIHRRAKYL 59
           MPELPEVE +R GI+PHL G  +  +V+R  +LRWPIP++L  +L GQ I+ + RRAKYL
Sbjct: 1   MPELPEVETTRRGIAPHLEGQRVSRVVVRERRLRWPIPEDLDVRLSGQRIVLVERRAKYL 60

Query: 60  IIETAVGSAIVHLGMSGSLRILDGDFPAAKHDHVDLVMTSGKRLRYNDPRRFGAWLWCAP 119
           +I   VG+ I HLGMSG+LR+++   PAAKH+HVD+ + SG  LRY DPRRFGA LW   
Sbjct: 61  LINAEVGTLISHLGMSGNLRLVEVGMPAAKHEHVDIELESGLALRYTDPRRFGAMLWSQD 120

Query: 120 DESHEVLGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGVGNIYANESLFTS 179
             +HE+L RLGPEPLT+ F+ E +   +R K +AVK FIMDNA VVGVGNIYA E+LF +
Sbjct: 121 PHNHELLIRLGPEPLTDLFDGERLFQLSRGKSMAVKPFIMDNAVVVGVGNIYATEALFAA 180

Query: 180 RLHPLRPAHSLSLEEWQTLVANIKQVLQVAIKQGGTTLKDFTQSDGKPGYFAQELQVYGK 239
            + P R A  +S   +  L   IK+VL  AI++GGTTL+DF   DG+PGYF QEL VYG+
Sbjct: 181 GIDPRRAAGGISRGRYLKLAIEIKRVLAAAIERGGTTLRDFIGGDGQPGYFQQELFVYGR 240

Query: 240 AKQPCPHCGEPLCEQKIAQRNTFFCPQCQ 268
             + C  CG  L    + QR + FCP+CQ
Sbjct: 241 GGEACKVCGSELRNVVLGQRASVFCPKCQ 269