Pairwise Alignments

Query, 269 a.a., formamidopyrimidine-DNA glycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 270 a.a., Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) from Variovorax sp. SCN45

 Score =  204 bits (518), Expect = 2e-57
 Identities = 113/271 (41%), Positives = 165/271 (60%), Gaps = 5/271 (1%)

Query: 1   MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQELKQLEGQTILAIHRRAKYLI 60
           MPELPEVEV+R GI+  + G  I ++ +  P LRW +    + L G+ +L + RR KYL+
Sbjct: 1   MPELPEVEVTRRGIADRIAGARIDAVRIGKP-LRWALMVLPEALVGRRVLQVRRRGKYLL 59

Query: 61  IETAVGSAIVHLGMSGSLRILDGDFPAAKHDHVDLVMTSGKRLRYNDPRRFGAWLWCAPD 120
           I+   G  ++HLGMSGSLR      P   HDH DLV   G  LR NDPRRFGA ++   +
Sbjct: 60  IDLDRGILLLHLGMSGSLRFDAVLPPPGAHDHFDLVTDLGT-LRLNDPRRFGAVVYVENE 118

Query: 121 ESH---EVLGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGVGNIYANESLF 177
           ++    ++LG LG EPL E F+ +      + ++ AVK  ++    VVGVGNIYA+E+LF
Sbjct: 119 DAPWAIKLLGGLGMEPLGEDFDLDVFHAGLKKRKTAVKQVLLAGDVVVGVGNIYASEALF 178

Query: 178 TSRLHPLRPAHSLSLEEWQTLVANIKQVLQVAIKQGGTTLKDFTQSDGKPGYFAQELQVY 237
            + + P   A  +S      L A ++++L  A+++GG+TL+DF+  DG+ GYF  E  VY
Sbjct: 179 QAGIRPTLSAARISRPRAAKLHAAVREILARAVEKGGSTLRDFSNIDGQNGYFQLEATVY 238

Query: 238 GKAKQPCPHCGEPLCEQKIAQRNTFFCPQCQ 268
           G+A +PC  C  P+   +  QR+T++CP CQ
Sbjct: 239 GRAGEPCRVCATPIRLLRQGQRSTYYCPNCQ 269