Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  259 bits (662), Expect = 3e-73
 Identities = 153/373 (41%), Positives = 229/373 (61%), Gaps = 12/373 (3%)

Query: 196 AEFRAQREADLYDQMISAIGLSVVGLVFTIIAVSVLVSRGIA-PLQHVVSSLQAVAAGGG 254
           ++  AQR+ D++   I+ + ++ +GL+     V  LV  GIA PL+ +V+ L  +A G G
Sbjct: 348 SDLEAQRKTDIFGMTIAGLLIAGIGLL-----VIWLVGHGIARPLKQMVAMLNDIAQGEG 402

Query: 255 DLTARIKVESQDEIGDVAKAFNAFMDKLHPLMTDIRASANTVEAAAQ---ELDQQTSQAS 311
           DLT R+  +  DE+G +A  FN F+ KL  ++T + +S   V  +++   ++  +T+Q  
Sbjct: 403 DLTRRLTSDRADELGAIANGFNTFLIKLQGMITQVVSSVQKVSDSSEHTADIAIRTNQGV 462

Query: 312 HKMDGHCLETDKVVAAVTEMSATAREVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIG 371
           HK     +E D+V  AV EM+ATA++VA N    AQA   A+   +   + V      IG
Sbjct: 463 HKQ---MVEIDQVATAVHEMTATAQDVARNATQAAQAASHADQAASQGMRIVRDTSTSIG 519

Query: 372 ELVNEVNQTSAAVGDLSQQAAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAV 431
            L  E+ +  + V  L++ +  I  +L  I  IAEQTNLLALNAAIEAARAGEQGRGFAV
Sbjct: 520 ALAEEIGKAVSVVQTLAKDSENINAILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAV 579

Query: 432 VADEVRSLASRTQNSTKEIGEMLNALHQGVSKAVQSMNISQERGEKTALESVQIKESLAG 491
           VADEVR+LA +TQ +T+EI  M+  L QG    V+ M  SQ R +++   + +  E+L  
Sbjct: 580 VADEVRNLAQKTQKATEEIQTMIQQLQQGTRDVVRVMEDSQSRTDESVQHAAKAAEALET 639

Query: 492 ISKAVSLIHDMGIQTASAAEQQSAVAEDINQNLVAIQQIVNELSESFKQTESVSASLSHS 551
           I++AVS+I+DM  Q ASAAE+QSAVAEDIN+N++ I Q+ NE++    ++ + SA L+  
Sbjct: 640 ITQAVSVINDMNTQIASAAEEQSAVAEDINRNVINIGQVANEVAGGADESSAASADLTKL 699

Query: 552 GQQMGTLVGHFKL 564
            +Q   L+  FK+
Sbjct: 700 AEQQRRLINQFKV 712