Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 676 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  228 bits (582), Expect = 5e-64
 Identities = 135/355 (38%), Positives = 216/355 (60%), Gaps = 5/355 (1%)

Query: 210 MISAIGLSVVGLVFTIIAVSVLVSRGIAPLQHVVSSLQAVAAGGGDLTARIKVESQDEIG 269
           ++SA+  +V  L+F + A     +R    L+ + + +  VAAG  D+T     +S+DE+G
Sbjct: 327 LVSALS-AVFLLIFYLYAGFYASTR--TTLRRLGAMMDKVAAG--DMTVTFVAQSRDELG 381

Query: 270 DVAKAFNAFMDKLHPLMTDIRASANTVEAAAQELDQQTSQASHKMDGHCLETDKVVAAVT 329
           D+ + FN  + K+H L+  +  + + VE  A +++  ++Q++  + G  ++ ++V  A+ 
Sbjct: 382 DLGQVFNGTVAKIHDLIERVGHTVSQVELQAGQVETVSAQSNQAVSGQRMQIEQVATAMN 441

Query: 330 EMSATAREVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGELVNEVNQTSAAVGDLSQ 389
           +MS+TA+EVA +  +   +  S N +    +  V      I  L  E++Q+   +  L+ 
Sbjct: 442 QMSSTAQEVARSAAAAVSSAHSVNDETVSGRSLVQSQQGSIARLATEIDQSVQVINQLAT 501

Query: 390 QAAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQNSTKE 449
            +  I+ VL+VI  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA RTQ+ST+E
Sbjct: 502 DSQSISSVLEVIKSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLARRTQHSTEE 561

Query: 450 IGEMLNALHQGVSKAVQSMNISQERGEKTALESVQIKESLAGISKAVSLIHDMGIQTASA 509
           I +M++ L  GV+ AV++M  S +    T  +S +++++L  I  AV +I D   Q A+A
Sbjct: 562 IEQMISRLQSGVAAAVKAMGSSHDMASGTVGQSERVQQALENILGAVGMIVDQNQQIAAA 621

Query: 510 AEQQSAVAEDINQNLVAIQQIVNELSESFKQTESVSASLSHSGQQMGTLVGHFKL 564
            EQQ+AVA DI+QN+V I +     +E   QTE+ S  LS    ++  L+G F++
Sbjct: 622 VEQQTAVAHDIDQNIVEINRAGEHAAEGAYQTEAASRQLSLQVIELKQLIGAFRV 676