Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  232 bits (592), Expect = 3e-65
 Identities = 160/470 (34%), Positives = 244/470 (51%), Gaps = 15/470 (3%)

Query: 98  FDSDGYFFAYDSQGVNTLHAIKPELEGKNLYGMKDENGVAVIAGLIDAS---KTGDGFLY 154
           F+   +     S G+    + +PE+ GK L       G  ++  L   S   +  D  + 
Sbjct: 255 FNGAAHLDILSSTGLIAASSGQPEIVGKTLMDTVGAEGKEIVQLLASDSPMIREQDHTIR 314

Query: 155 FSWHKPTINAQAPKLGYAEYLPKWDWVLGTGIYIDDVDTQVAEFRAQREADLYDQMISAI 214
             +    I A A   G    LP+ + +L   + + DV    A+     +A L     + +
Sbjct: 315 AVYPVKPI-ADAKSWGVVVTLPR-NVMLADTLKLQDV-LDKAQAAGTLKALLVGAAAALL 371

Query: 215 GLSVVGLVFTIIAVSVLVSRGIAPLQHVVSSLQAVAAGGGDLTARIKVESQDEIGDVAKA 274
           GL ++ L  T +           P+ +V + L+ +A+G GDLT R+    +DE+G++A  
Sbjct: 372 GLLLIWLTATGVT---------RPINNVAAMLKDIASGDGDLTQRLAYAKKDELGELANW 422

Query: 275 FNAFMDKLHPLMTDIRASANTVEAAAQELDQQTSQASHKMDGHCLETDKVVAAVTEMSAT 334
           FN F+DKL P +  I+ S       A +      Q S  M     E D+V  A  EMSAT
Sbjct: 423 FNRFLDKLQPTIAQIKQSITEARGTADQSSAIARQTSEGMQVQFREIDQVATASNEMSAT 482

Query: 335 AREVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGELVNEVNQTSAAVGDLSQQAAKI 394
           A +VA++  + A A   A+         +  +   I  L  EV++    V  L+  + +I
Sbjct: 483 AHDVANSASNAASAARGADQSAREGMSIIEQSTRDITSLAEEVSKAVGEVEALAVNSEQI 542

Query: 395 TQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQNSTKEIGEML 454
             VL+VI  IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA RTQ+S +EI  ++
Sbjct: 543 GSVLEVIRSIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRNLAKRTQDSVEEIRLVI 602

Query: 455 NALHQGVSKAVQSMNISQERGEKTALESVQIKESLAGISKAVSLIHDMGIQTASAAEQQS 514
             +  G    V +M+ SQ + +  A +  Q  ++L  IS AV++I DM +Q ASAAEQQS
Sbjct: 603 ERIQSGTRGVVATMHSSQSQAQSNAGQIHQAAQALGKISDAVTVISDMNLQIASAAEQQS 662

Query: 515 AVAEDINQNLVAIQQIVNELSESFKQTESVSASLSHSGQQMGTLVGHFKL 564
           AVAE++N+N+ AI+ +   L+    ++ ++S+ L+    Q   L+  F++
Sbjct: 663 AVAEEVNRNVSAIRTVTETLTGQATESAAISSQLNALASQQMKLMDQFRV 712