Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  229 bits (585), Expect = 2e-64
 Identities = 138/363 (38%), Positives = 211/363 (58%), Gaps = 2/363 (0%)

Query: 202 READLYDQMISAIGLSVVGLVFTIIAVSVLVSRGIAPLQHVVSSLQAVAAGGGDLTARIK 261
           R+AD        +  +V+ L+F ++A   +  + + PL   +   Q VA+G  DL+  + 
Sbjct: 278 RDADAAHAKQLLLLATVLALIFGLVAAWAITRQIVIPLNQTLQVAQRVASG--DLSHNLT 335

Query: 262 VESQDEIGDVAKAFNAFMDKLHPLMTDIRASANTVEAAAQELDQQTSQASHKMDGHCLET 321
              QDE+G + +A  +    L  L+  I      + +AA++L   T Q S  ++   +ET
Sbjct: 336 SMRQDELGQLQRAMQSMTVGLRELIGGISDGVTQIASAAEQLSAVTEQTSAGVNSQKVET 395

Query: 322 DKVVAAVTEMSATAREVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGELVNEVNQTS 381
           D+V  A+ EM+AT +EVA N    ++A  +A+ Q     K V  AI  I  L  EV  ++
Sbjct: 396 DQVATAMNEMAATVQEVARNAEEASEAAVAADQQAREGDKVVGEAIAQIERLATEVGNST 455

Query: 382 AAVGDLSQQAAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAS 441
            A+GDL +++ KI  VL VI  +A+QTNLLALNAAIEAARAGE GRGFAVVADEVRSLA 
Sbjct: 456 VAMGDLKRESDKIGSVLDVIKSVAQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQ 515

Query: 442 RTQNSTKEIGEMLNALHQGVSKAVQSMNISQERGEKTALESVQIKESLAGISKAVSLIHD 501
           RTQ ST+EI E++  L  G  +    M+ S+   + +     +   +LA I++ VS I  
Sbjct: 516 RTQKSTEEIEELIVGLQSGTQQVATIMDNSRGLTDSSVELPRRAGSALASITRTVSTIQA 575

Query: 502 MGIQTASAAEQQSAVAEDINQNLVAIQQIVNELSESFKQTESVSASLSHSGQQMGTLVGH 561
           M  Q A+AAEQQSAVAE+IN++++ ++ +  + + + ++T + S  L+  G  +  LVG 
Sbjct: 576 MNSQIATAAEQQSAVAEEINRSVLNVRDVSEQTAAASEETAASSTELARLGTHLQALVGR 635

Query: 562 FKL 564
           F++
Sbjct: 636 FRV 638