Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  219 bits (558), Expect = 2e-61
 Identities = 138/370 (37%), Positives = 209/370 (56%), Gaps = 7/370 (1%)

Query: 200 AQREADLYDQMISAIGLSVVGLV----FTIIAVSVLVSRGIA-PLQHVVSSLQAVAAGGG 254
           A + A L   + S   + V+G++       I ++VL++R I  PL   +   Q VA+G  
Sbjct: 174 ANQAASLAQSVFSQSRIWVIGMIVLTALVTIGLAVLLTRSIVLPLAQSLKVAQGVASG-- 231

Query: 255 DLTARIKVESQDEIGDVAKAFNAFMDKLHPLMTDIRASANTVEAAAQELDQQTSQASHKM 314
           DLT  I V  +DE   + +A  +  + L   +  I  S+N + +A++EL   T  A+  +
Sbjct: 232 DLTGEISVCGRDEPARLQQALKSMQENLRDTIRRISESSNQLASASEELSCVTEDATRGL 291

Query: 315 DGHCLETDKVVAAVTEMSATAREVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGELV 374
                E ++   AV +M+A   EVASN  +T+QA   ++      +++V   +  I  L 
Sbjct: 292 HQQSQEIEQAATAVNQMTAAVEEVASNAVATSQASRESDRIAQRGREQVQQTVVSIEALA 351

Query: 375 NEVNQTSAAVGDLSQQAAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVAD 434
            +V      V DL+Q+   I++VL VI  IAEQTNLLALNAAIEAARAG+ GRGFAVVAD
Sbjct: 352 TDVTDNVTQVEDLAQKVYGISKVLDVIRSIAEQTNLLALNAAIEAARAGDAGRGFAVVAD 411

Query: 435 EVRSLASRTQNSTKEIGEMLNALHQGVSKAVQSMNISQERGEKTALESVQIKESLAGISK 494
           EVR+LA RTQ ST+EI +M++ + QG  +AV SM  S  R   T   +     +L  I+ 
Sbjct: 412 EVRALAHRTQQSTQEIEQMISGIQQGTDQAVSSMQQSNTRARSTLDIAKSAGTALEEIAS 471

Query: 495 AVSLIHDMGIQTASAAEQQSAVAEDINQNLVAIQQIVNELSESFKQTESVSASLSHSGQQ 554
           A +LI++  +  ASA+EQQ+AVA ++++NL+ I+ + ++ S    QT + S  LS     
Sbjct: 472 AFTLINERNLVIASASEQQAAVAREVDRNLMNIRDLAHQTSTGANQTSAASHDLSRLAVD 531

Query: 555 MGTLVGHFKL 564
           + TLV  F +
Sbjct: 532 LNTLVARFSV 541