Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  215 bits (548), Expect = 4e-60
 Identities = 137/394 (34%), Positives = 214/394 (54%), Gaps = 19/394 (4%)

Query: 175 LPKWDWVLGTGIYIDDVDTQVAEFRAQREADLYDQMISAIGLSVVGLVFTIIAVSVLVSR 234
           LP  DW +G  I  D     + +FR            SA+   ++ +V   + +S+L+  
Sbjct: 248 LPGADWYIGLSIDKDKAYAPLGKFRT-----------SALIAMLIAVVAIAVLLSLLIQV 296

Query: 235 GIAPLQHVVSSLQAVAAGGGDLTARIKVESQDEIGDVAKAFNAFMDKLHPLMTDIRASAN 294
            + PL  +  ++Q +A G GDLT R+ V S+DE G+V  AFN F++++H  ++++ ++  
Sbjct: 297 LLRPLTTMGVAMQDIAQGEGDLTRRLVVTSKDEFGEVGSAFNQFVERIHASISEVSSATR 356

Query: 295 TVEAAAQELDQQTSQASHKMDGHCLETDKVVAAVTEMSATAREVASNTYSTAQAIESANS 354
            V   +Q +   ++ +    D     T+ V AA+ E+ A  +E+A N    +Q    A+ 
Sbjct: 357 QVHDLSQRVMASSNASIIGSDEQSARTNSVAAAINELGAATQEIARNAADASQHASGASE 416

Query: 355 QIAVAQKEVNLAIDGIGELVNEVNQTSAAVGDLSQQAAKITQVLKVIGDIAEQTNLLALN 414
           Q    +K V   I  + EL  +++ +   +  L+     I  +L VI  I++QTNLLALN
Sbjct: 417 QADDGRKVVEQTILAMSELSQKISLSCTQIETLNASTDNIGHILDVIKGISQQTNLLALN 476

Query: 415 AAIEAARAGEQGRGFAVVADEVRSLASRTQNSTKEIGEMLNALHQGVSKAVQSMNISQER 474
           AAIEAARAGE GRGFAVVADEVR+LA RTQ S +EI +M+ +L  G  +AV +MN SQ  
Sbjct: 477 AAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHKMITSLQVGSREAVTTMNASQTS 536

Query: 475 GEKTALESVQIKESLAGISKAVSLIHDMGIQTASAAEQQSAVAE----DINQNLVAIQQI 530
            E++   + Q  E L  +++ +  I  M    A+A E+Q+AV E    DINQ  +  QQ 
Sbjct: 537 SEESVEVANQAGERLVSVTQRIVEIDGMNQSVAAATEEQTAVVETLNVDINQINLLNQQG 596

Query: 531 VNELSESFKQTESVSASLSHSGQQMGTLVGHFKL 564
           V  L+E+ K  +    +LS    ++  LV  FK+
Sbjct: 597 VANLNETLKDCD----ALSQQANRLKQLVDSFKI 626