Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

 Score =  215 bits (548), Expect = 3e-60
 Identities = 132/362 (36%), Positives = 200/362 (55%), Gaps = 5/362 (1%)

Query: 203 EADLYDQMISAIGLSVVGLVFTIIAVSVLVSRGIAPLQHVVSSLQAVAAGGGDLTARIKV 262
           EA    QM+      ++  + +++ ++ L SR +A L+  +SS    AA    L  R+++
Sbjct: 192 EAGRTKQMVIIAAGLIISFITSLVIITNLRSR-VAYLKDRMSS----AAANLSLRTRLEL 246

Query: 263 ESQDEIGDVAKAFNAFMDKLHPLMTDIRASANTVEAAAQELDQQTSQASHKMDGHCLETD 322
           +  DE+ D+ K+FNAF+DK+H  + ++  ++  +   A  + Q+              T 
Sbjct: 247 DGNDELCDIGKSFNAFIDKVHHSIEEVAENSKELATMASSVSQRAHMTQSNCASQRDRTV 306

Query: 323 KVVAAVTEMSATAREVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGELVNEVNQTSA 382
           +V  A+ E+ AT  E+ASN    A   + A       +K V    + I  LVNE++  + 
Sbjct: 307 QVATAIHELGATVSEIASNAAMAADVAKQATLHSGEGKKVVGEVQNRIQTLVNELDNATQ 366

Query: 383 AVGDLSQQAAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASR 442
            V  L+ Q   I+  L  I  I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LASR
Sbjct: 367 VVSSLATQINGISSTLDTIRSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASR 426

Query: 443 TQNSTKEIGEMLNALHQGVSKAVQSMNISQERGEKTALESVQIKESLAGISKAVSLIHDM 502
           +  ST+EI +++N L    ++AV++M   + + +     S +  +SL  I+  +  I+D 
Sbjct: 427 SAASTEEIQQVINRLQTESTRAVEAMEKGRSQSDVVVEFSAKANQSLTEINSQIDQINDQ 486

Query: 503 GIQTASAAEQQSAVAEDINQNLVAIQQIVNELSESFKQTESVSASLSHSGQQMGTLVGHF 562
            IQ A+A E+QS V EDIN+N+  I Q+  E S    +    SASL     Q+  LVG F
Sbjct: 487 NIQVATATEEQSTVVEDINRNVEDINQLTTETSHVADELSRASASLQRLSSQLDKLVGSF 546

Query: 563 KL 564
           +L
Sbjct: 547 EL 548