Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  267 bits (683), Expect = 7e-76
 Identities = 170/564 (30%), Positives = 291/564 (51%), Gaps = 35/564 (6%)

Query: 9   SLRSRTKLLLLTVIPLIVITALVMAVNYQSGLSTLQKELENYRTDLIDAKKKELQAYLMM 68
           S+  R  L+L+  + ++V+  L+M              L     DL  AK ++ + +++ 
Sbjct: 8   SISRRLWLILVVAVAMLVVLGLLM--------------LRQIHGDLYQAKAEKTR-HVVQ 52

Query: 69  GVTAVKPLYESDKAGEN------QAQAKQILKAMRFDSDGYFFAYDSQGVNTLHAIKPEL 122
               V   Y+  +A         Q QA Q+++A+R+D D YF+  D      +H   P+L
Sbjct: 53  TAAGVLAYYQGLEAAGTLSREAAQQQALQVVRALRYDHDDYFWINDLGPKMIMHPANPKL 112

Query: 123 EGKNLYGMKDENGVAVIAGLIDASKTGD-GFLYFSWHKPTINAQAPKLGYAEYLPKWDWV 181
           + ++L  ++D +G AV   ++  ++  D G + + W KP  +    K  Y +    W W+
Sbjct: 113 DDQDLSAIRDPDGFAVFNEMVALARQQDAGPVNYRWPKPGASEPVAKTSYIQLFKPWGWI 172

Query: 182 LGTGIYIDDVDTQVAEFRAQREADLYDQMISAIGLSVVGLVFTIIAVSVLVSRGIA-PLQ 240
           +G+G+Y+DDV  + A  R  R+A L            VG+   +  V +L++R IA PLQ
Sbjct: 173 IGSGVYVDDVQAEFA--RQLRDASLVG----------VGIALLMALVVMLIARSIARPLQ 220

Query: 241 HVVSSLQAVAAGGGDLTARIKVESQDEIGDVAKAFNAFMDKLHPLMTDIRASANTVEAAA 300
             V ++  +A+G  DLT R+     DEI  + + FN F  KL  ++  ++ +A+ +  +A
Sbjct: 221 EAVQAMGNIASGESDLTRRLDTHGSDEITHLGEHFNRFNGKLQGVVGQLQGAAHALAQSA 280

Query: 301 QELDQQTSQASHKMDGHCLETDKVVAAVTEMSATAREVASNTYSTAQAIESANSQIAVAQ 360
             +      A  +     L+ D+V  AV E++   ++VA      A  + +A  Q+   Q
Sbjct: 281 GHVGDNAGAAQQRSAQQSLQMDQVATAVNEVTYAVQDVAKTAEQAAGEMRTAQQQVTHGQ 340

Query: 361 KEVNLAIDGIGELVNEVNQTSAAVGDLSQQAAKITQVLKVIGDIAEQTNLLALNAAIEAA 420
           + ++ ++  I  L   +++    + DL+  + +I  VL VI  IAEQTNLLALNAAIEAA
Sbjct: 341 QAIHGSLAQIDRLSLTIDEAVQVIRDLAGHSTRIGGVLDVIRSIAEQTNLLALNAAIEAA 400

Query: 421 RAGEQGRGFAVVADEVRSLASRTQNSTKEIGEMLNALHQGVSKAVQSMNISQERGEKTAL 480
           RAGEQGRGFAVVADEVR LA RT  ST EI  M+  L      AV++++ S E   +T  
Sbjct: 401 RAGEQGRGFAVVADEVRLLAQRTAQSTAEIHTMIEHLQSQSDAAVKAIDTSSEASRQTVE 460

Query: 481 ESVQIKESLAGISKAVSLIHDMGIQTASAAEQQSAVAEDINQNLVAIQQIVNELSESFKQ 540
           ++ +   SL  I++ ++ +  +    ASA  QQS V E+IN+N++    +  + +++ +Q
Sbjct: 461 QAREAGASLDAINQVLNNLTALNASIASATLQQSHVVEEINRNVLDTAGLSQQTADAARQ 520

Query: 541 TESVSASLSHSGQQMGTLVGHFKL 564
           +     +L    +++  L+  F++
Sbjct: 521 SSDAGVALGRLSEELEQLLRQFRV 544