Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 643 a.a., Methyl-accepting chemotaxis protein PctB from Pseudomonas putida KT2440

 Score =  221 bits (563), Expect = 7e-62
 Identities = 144/474 (30%), Positives = 252/474 (53%), Gaps = 25/474 (5%)

Query: 91  QILKAMRFDSDGYFFAYDSQGVNTLHAIKPELEGKNLYGMKDENGVAVIAGLIDASKTGD 150
           +I+ ++ F   G+ F  D+ G   +   K ++  KNL  +   + + V AG+ D +  G 
Sbjct: 195 EIINSVDFGGIGHAFLADANGQVIVSPNKDQVM-KNLKDIYPGSNLRVAAGMQDVTLDG- 252

Query: 151 GFLYFSWHKPTINAQAPKLGYAEYLPKWDWVLGTGIYIDDVDTQVAEFRAQREADLYDQM 210
                   +  I + AP  G    LP   W +G  I  D     +++FR      +   +
Sbjct: 253 --------QDRIISFAPVAG----LPSAQWYIGLSIDRDKAYAALSQFRTSAIIAMLIAV 300

Query: 211 ISAIGLSVVGLVFTIIAVSVLVSRGIAPLQHVVSSLQAVAAGGGDLTARIKVESQDEIGD 270
            +  GL  +GL+  ++         ++PL  +  +++ +A G GDLT R+ V+++DE G+
Sbjct: 301 AAIAGL--LGLLIPVL---------MSPLTTMGRAMRDIAEGEGDLTRRLAVQNKDEFGE 349

Query: 271 VAKAFNAFMDKLHPLMTDIRASANTVEAAAQELDQQTSQASHKMDGHCLETDKVVAAVTE 330
           +A +FN F++++H  ++++ ++   V   ++++   ++ +    +   + T+ V AA+ E
Sbjct: 350 LATSFNRFVERIHASISEVSSATRLVHDLSEKVVSASNASIIGSEEQSMRTNSVAAAINE 409

Query: 331 MSATAREVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGELVNEVNQTSAAVGDLSQQ 390
           + A  +E+A N    +Q    A+ Q    ++ V  AI  +  L   ++++ A +  L+  
Sbjct: 410 LGAATQEIARNAADASQHASGASEQAHGGREVVEEAISAMTALSQRISESCAQIETLNAS 469

Query: 391 AAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQNSTKEI 450
             +I ++L VI  I++QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA RTQ S +EI
Sbjct: 470 TDEIGKILDVIKGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEI 529

Query: 451 GEMLNALHQGVSKAVQSMNISQERGEKTALESVQIKESLAGISKAVSLIHDMGIQTASAA 510
             M+ +L  G  +AV +MN SQ   E+T   + Q  E LA +++ +  I  M    A+A 
Sbjct: 530 HRMITSLQVGSREAVHTMNTSQVSSEQTVQVANQAGERLASVTQRIGEIDGMNQSVATAT 589

Query: 511 EQQSAVAEDINQNLVAIQQIVNELSESFKQTESVSASLSHSGQQMGTLVGHFKL 564
           E+Q+AV E +N ++  I  +  +  E+  +T      L+    ++  LVG F++
Sbjct: 590 EEQTAVVESLNLDITQINALNQQGVENLNETLRHCDQLAQQAGRLKQLVGSFRI 643