Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 676 a.a., hypothetical protein from Pseudomonas sp. DMC3

 Score =  228 bits (580), Expect = 8e-64
 Identities = 139/375 (37%), Positives = 220/375 (58%), Gaps = 8/375 (2%)

Query: 191 VDTQVAEFRAQREADLYDQMISAIGLSVVG-LVFTIIAVSVLVSRGIAPLQHVVSSLQAV 249
           +D Q+ +  AQ    +   ++ A  LSVV  L+F +       +R    L+ + + +  V
Sbjct: 309 LDNQLQQRLAQNRTHM---ILQASALSVVFVLIFYLYGGFYASTR--TTLKSLGAMMDKV 363

Query: 250 AAGGGDLTARIKVESQDEIGDVAKAFNAFMDKLHPLMTDIRASANTVEAAAQELDQQTSQ 309
           AAG  D+T   K  S+DE+G++ + FN  + K+H L+  +  +   VE  A +++  ++Q
Sbjct: 364 AAG--DMTVNFKASSRDELGELGEVFNGTVKKIHDLIERVGHTVGEVERQAGQVESVSAQ 421

Query: 310 ASHKMDGHCLETDKVVAAVTEMSATAREVASNTYSTAQAIESANSQIAVAQKEVNLAIDG 369
           ++  + G   + ++V  A+ +MSAT+ EVA +  +   +  S N +    +  V      
Sbjct: 422 SNQAVAGQRSQIEQVATAMNQMSATSMEVARSAAAAVSSAHSVNDETLSGRGLVESQQGS 481

Query: 370 IGELVNEVNQTSAAVGDLSQQAAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGF 429
           I  L +E++Q+   +  L+  +  I++VL+VI  IAEQTNLLALNAAIEAARAGEQGRGF
Sbjct: 482 IAALASEIDQSVLVINQLASDSQSISRVLEVIKSIAEQTNLLALNAAIEAARAGEQGRGF 541

Query: 430 AVVADEVRSLASRTQNSTKEIGEMLNALHQGVSKAVQSMNISQERGEKTALESVQIKESL 489
           AVVADEVR+LA RTQ ST+EI +M+  LH GV  AV++M +S +    T  +S +++++L
Sbjct: 542 AVVADEVRTLAKRTQQSTEEIEQMIAKLHGGVGAAVKAMGVSHQMANGTVGQSEKVQQAL 601

Query: 490 AGISKAVSLIHDMGIQTASAAEQQSAVAEDINQNLVAIQQIVNELSESFKQTESVSASLS 549
             I  AV +I D   Q A+A EQQ+AVA DI+QN+V I +     ++   QTE  S +LS
Sbjct: 602 ENILGAVGMIVDQNQQIAAAVEQQTAVAHDIDQNIVEINRAGERTAQGAHQTEDASRALS 661

Query: 550 HSGQQMGTLVGHFKL 564
               ++  L+  F++
Sbjct: 662 AQVVELKQLISAFRV 676