Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., methyl-accepting chemotaxis protein from Pseudomonas fluorescens SBW25

 Score =  285 bits (728), Expect = 4e-81
 Identities = 184/569 (32%), Positives = 306/569 (53%), Gaps = 36/569 (6%)

Query: 7   LSSLRSRT---KLLLLTVIPLIVITALVMAVNYQSGLSTLQKELENYRTDLIDAKKKELQ 63
           ++SLR+ +   +L L+ ++ ++++ AL + +            L+    DL  AK+ + Q
Sbjct: 1   MNSLRNMSISRRLWLILIVAVLMLMALGLLM------------LKQIHDDLYQAKRLQTQ 48

Query: 64  AYLMMGVTAVKPLYES-DKAG-----ENQAQAKQILKAMRFDSDGYFFAYDSQGVNTLHA 117
            +++   + +   Y S +  G       Q QA   ++ +R+D D YF+  D   V  +H 
Sbjct: 49  -HVVQTASGILTFYHSLETTGVMTREAAQKQAMNAVRGLRYDHDDYFWINDLTPVMIMHP 107

Query: 118 IKPELEGKNLYGMKDENGVAVIAGLIDASKT-GDGFLYFSWHKPTINAQAPKLGYAEYLP 176
             P+L+G+NL  ++D +G AV    +  +K  G G + + W KP   A   K  Y +   
Sbjct: 108 ANPKLDGQNLSAIRDPDGFAVFNEFVILAKAKGAGIVNYRWPKPGAEAPVAKTSYIQLFE 167

Query: 177 KWDWVLGTGIYIDDVDTQVAEFRAQREADLYDQMISAIGLSVV-GLVFTIIAVSVLVSRG 235
            W W++G+G+Y+DDV    AEF AQ    ++      +G++VV  L+ ++IA S+     
Sbjct: 168 PWGWIIGSGVYVDDVQ---AEFSAQ----VWKTSFIGLGIAVVMALLVSLIARSI----- 215

Query: 236 IAPLQHVVSSLQAVAAGGGDLTARIKVESQDEIGDVAKAFNAFMDKLHPLMTDIRASANT 295
           + PLQ  V+++  +A+G  DLT  +    QDE+  +++ FN+F  KL  ++T ++A AN 
Sbjct: 216 VRPLQDAVNAMGNIASGESDLTRSLDTHGQDEVTQLSQHFNSFTAKLRLVVTQLQACANA 275

Query: 296 VEAAAQELDQQTSQASHKMDGHCLETDKVVAAVTEMSATAREVASNTYSTAQAIESANSQ 355
           +  ++QEL    +QA  +      + + V  A+ E++   ++VA N    A  +  A +Q
Sbjct: 276 LGQSSQELGANATQAHDRSQQQSQQMELVATAINEVTYGVQDVAKNAEHAASEMRDAQAQ 335

Query: 356 IAVAQKEVNLAIDGIGELVNEVNQTSAAVGDLSQQAAKITQVLKVIGDIAEQTNLLALNA 415
               Q  ++ ++  I +L   ++Q    +  LS ++ +I  VL+VI  IA+QTNLLALNA
Sbjct: 336 AQQGQVNIDGSLQQIDQLSGTISQAVEVIRTLSAESTQIGSVLEVIRSIADQTNLLALNA 395

Query: 416 AIEAARAGEQGRGFAVVADEVRSLASRTQNSTKEIGEMLNALHQGVSKAVQSMNISQERG 475
           AIEAARAGEQGRGFAVVADEVR LA RTQ ST EI  M+  L      AV+ ++ S    
Sbjct: 396 AIEAARAGEQGRGFAVVADEVRLLAQRTQKSTAEIQGMIERLQGHSEAAVKVISDSHSAS 455

Query: 476 EKTALESVQIKESLAGISKAVSLIHDMGIQTASAAEQQSAVAEDINQNLVAIQQIVNELS 535
           + T  ++ Q   SL  I +A++ ++ +    ASA  QQ+ V EDINQN+     + +  +
Sbjct: 456 QLTIEQAGQAGASLTAIGQALNNLNGLNASIASATLQQAHVVEDINQNVTQAAGLSHSTA 515

Query: 536 ESFKQTESVSASLSHSGQQMGTLVGHFKL 564
            + +Q+   SA L    +Q+  L+  FK+
Sbjct: 516 LAAEQSSVASAQLRGLSEQLDGLLRQFKV 544