Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 565 a.a., methyl-accepting chemotaxis protein from Magnetospirillum magneticum AMB-1

 Score =  224 bits (570), Expect = 9e-63
 Identities = 172/570 (30%), Positives = 278/570 (48%), Gaps = 75/570 (13%)

Query: 17  LLLTVIPLIVITALVMAVNYQSGLSTLQKELENYRTDLIDAKKKELQAYLMMGVTAVKPL 76
           +LL ++   V+  +  A+     L+ L++ + N R + + A  +  +  L       K  
Sbjct: 7   ILLKLMTTAVLALVGFAILSAVALTQLRQSMLNDRIEKVAALAEVARGTL-------KSF 59

Query: 77  YESDKAGE-----NQAQAKQILKAMRFDSDGYFFAYDSQGVNTLHAIKPELEGKNLYGMK 131
           ++  KAGE      +AQA + L+ +R+  D YFF YD  GVN LH ++PE EGKN    K
Sbjct: 60  HDRAKAGEFDEATAKAQAIETLRPLRYQGDEYFFIYDFDGVNVLHPVRPEREGKNFIDSK 119

Query: 132 DENGVAVIAGLIDASKTGDGFLYFSWHKPTINAQAPKLGYAEYLPKWDWVLGTGIYIDDV 191
           D +G A I G+I+ SKTG    ++ + +P  +A  PK+  A     W  ++GTGIYIDD+
Sbjct: 120 DADGKAYIRGMIEGSKTGRAVEFYKFPRPGSDAPVPKVSVALSHAPWKLMVGTGIYIDDI 179

Query: 192 DTQVAEFRAQREADLYDQMISAIGLSVVGLVFTIIAVSV--LVSRGI-APLQHVVSSLQA 248
           DT    F A           +A+  + + LV  ++A+ +  ++SR I APL+ +    Q 
Sbjct: 180 DT---AFNA-----------AALRFAGIALVVCLVALGLVTVLSRDIAAPLRRLAEVAQR 225

Query: 249 VAAGGGDLTARI-KVESQDEIGDVAKAFNAFMDKLHPLMTDIRASANTVEAAAQELDQQT 307
           +A    D +A++ K E +DEIG +  A     D+         A   +   A+ +  Q  
Sbjct: 226 LAR--QDYSAQVEKTERKDEIGLLIAAVAVLRDEAASAAEARAAQQESYRTASIQRKQAR 283

Query: 308 SQASHKMDGHCLE-TDKVVAAVTEM---------------------SATAREVASNTYST 345
            Q +  ++      TD VV AV EM                     +++A + + N  + 
Sbjct: 284 LQLADDIESSIKRVTDVVVQAVGEMESAAAIVSGAVGEAGAKAGAAASSAEQASGNVATV 343

Query: 346 AQAIESANSQIAVAQKEVNLAIDGIGELVNEVNQTSAAVGDLSQQAAKITQVLKVIGDIA 405
           A A E  ++ I+   ++V+ + D  G  V E  +T+A V  L++ A  I +V+ +I DIA
Sbjct: 344 AAAAEQLSASISEISRQVHESSDTSGRAVAEAERTNALVQGLAEAAGHIGEVVTLINDIA 403

Query: 406 EQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQNSTKEIGEMLNALHQGVSKAV 465
            QTNLLALNA IEAARAGE G+GFAVVA EV+ LA++T  +T EI   +N +     +AV
Sbjct: 404 GQTNLLALNATIEAARAGEAGKGFAVVAGEVKHLATQTAKATDEIYNQVNTVQARTREAV 463

Query: 466 QSMNISQERGEKTALESVQIKESLAGISKAVSLIHDMGIQTASAAEQQSAVAEDINQNLV 525
                                +++A I+  +  I+++    A+A E+Q A   +I +N+ 
Sbjct: 464 ---------------------DAIASIAATIGRINEIAGAIAAAVEEQGAATAEIARNVQ 502

Query: 526 AIQQIVNELSESFKQTESVSASLSHSGQQM 555
                  E+S +     + +AS   S   +
Sbjct: 503 QASAGTQEVSSAMGSLAAATASAGSSADSV 532