Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., Methyl-accepting chemotaxis protein 4 from Alteromonas macleodii MIT1002

 Score =  261 bits (668), Expect = 4e-74
 Identities = 168/550 (30%), Positives = 285/550 (51%), Gaps = 25/550 (4%)

Query: 16  LLLLTVIPLIVITALVMAVNYQSGLSTLQKELENYRTDLIDAKKKELQAYLMMGVTAVKP 75
           ++ L  +  +++TA+V+  +Y++    L+++  +    L++        + M+   A + 
Sbjct: 15  IVALITLLFVLLTAVVLNRHYEA----LKQKSYDENQHLVEV------VHTMLSSFAART 64

Query: 76  LYESDKAGENQAQAKQILKAMRFDSDGYFFAYDSQGVNTLHAIKPELEGKNLYGMKDENG 135
             + D+A   Q QA + +KA+R+D   YF+  D      +H IKP L+G++L   KD NG
Sbjct: 65  --DVDEATAKQ-QALEAVKALRYDGSNYFWIQDQTPSMVMHPIKPALDGQDLRTFKDGNG 121

Query: 136 VAVIAGLIDASKT-GDGFLYFSWHKPTINAQAPKLGYAEYLPKWDWVLGTGIYIDDVDTQ 194
            A    +    K+ G+GF+ + W  P   +   K+ Y +    W W +G+GIY+ +++ +
Sbjct: 122 KAFFIEMAQKVKSKGEGFVDYVWPLPGEESPTDKISYVKEFKPWGWTVGSGIYLTNLEKE 181

Query: 195 VAEFRAQREADLYDQMISAIGLSVVGLVFTIIAVSVLVSRGIAPLQHVVSSLQAVAAGGG 254
            A  R          +I+   L  V +V  ++ V V+    + P+Q V   ++ ++ G G
Sbjct: 182 FAHLR---------NVIAVFCL--VSIVLVVVLVYVIGGSIVKPVQEVSERMKDISQGEG 230

Query: 255 DLTARIKVESQDEIGDVAKAFNAFMDKLHPLMTDIRASANTVEAAAQELDQQTSQASHKM 314
           DLT  +    QDE+  +A+ FN + +K+   +  IR + N++   A+ ++  +  ++ + 
Sbjct: 231 DLTRSLPETGQDEVTRLARYFNEYTEKMRHSLLGIRENINSLTQQAELVETSSKNSNAQA 290

Query: 315 DGHCLETDKVVAAVTEMSATAREVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGELV 374
                   +V AA+ EM+    EV++N  S  ++  SA   +      V+  ++ I  L 
Sbjct: 291 QTQNENMLQVAAAMEEMTTQINEVSNNADSAEKSTSSARGNVQNGASVVDSTVNDIRSLT 350

Query: 375 NEVNQTSAAVGDLSQQAAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVAD 434
           +++   S+AV +L+ Q   I  VL VI  IAEQTNLLALNAAIEAARAGEQGRGFAVVAD
Sbjct: 351 SDIESVSSAVTELAAQTESIGAVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVAD 410

Query: 435 EVRSLASRTQNSTKEIGEMLNALHQGVSKAVQSMNISQERGEKTALESVQIKESLAGISK 494
           EVR+LASRT  ST EI  M+  L      AV ++ +SQ    KT   ++Q  ++L    +
Sbjct: 411 EVRTLASRTGQSTDEIQAMIEKLQSNAKSAVDAVKVSQSASTKTVDNAIQANQNLQEADR 470

Query: 495 AVSLIHDMGIQTASAAEQQSAVAEDINQNLVAIQQIVNELSESFKQTESVSASLSHSGQQ 554
            ++ I DM  + A A EQQ+  A + N  + A+    +    +  +  + S +L  S   
Sbjct: 471 LMTEIADMSSEIARATEQQAEAATEANMRINALSGAADSSLRTADELAAASQALRASCIA 530

Query: 555 MGTLVGHFKL 564
           +  +   FKL
Sbjct: 531 IMDIANRFKL 540