Pairwise Alignments

Query, 196 a.a., nucleoid occlusion factor SlmA from Vibrio cholerae E7946 ATCC 55056

Subject, 204 a.a., Rut operon repressor from Alteromonas macleodii MIT1002

 Score = 48.1 bits (113), Expect = 1e-10
 Identities = 37/147 (25%), Positives = 73/147 (49%), Gaps = 8/147 (5%)

Query: 1   MAGNKKIN---RREEILQALAEMLESNEGASRITTAKLAKQVGVSEAALYRHFPSKARMF 57
           M GN +     +RE I+QA  +  +   G +  +  KLA+   VS+  +Y HF +K  + 
Sbjct: 1   MVGNTRTRSDIKREAIIQAATQAFQEF-GVNGTSMDKLAELANVSKRTVYNHFSTKEELV 59

Query: 58  EGLIEFIEESLMSRINRIFDEEKDTLNRIR--LVMQLLLAFAERNPGLTRILSGHALMFE 115
             L+    ++ +  IN+ +D       ++   ++  +    +E +  L R+  GH   +E
Sbjct: 60  MHLVTQQWQTAILNINKKYDATLPLDEQLEDLILQDIEFMVSESHLDLARVAIGH-FFYE 118

Query: 116 NERLRDRINQLFERIETSLRQILRERK 142
            E+L+D + QL +  ET++ + L++ K
Sbjct: 119 PEKLKDEVAQL-KAQETAMHRWLKDAK 144