Pairwise Alignments

Query, 318 a.a., lipid A biosynthesis lauroyl acyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) from Escherichia coli BW25113

 Score =  112 bits (280), Expect = 1e-29
 Identities = 87/310 (28%), Positives = 136/310 (43%), Gaps = 9/310 (2%)

Query: 1   MSTMSQDKYSKPEFSFSLLHPKYWGVWLGFGLLALLVNLLPY---PVLLKIGRGLGQFSM 57
           M T   +    PEF  S  HP+YWG WLG   +A +    P    P+L ++GR    F+ 
Sbjct: 1   METKKNNSEYIPEFDKSFRHPRYWGAWLGVAAMAGIALTPPKFRDPILARLGR----FAG 56

Query: 58  RFGKKRVHIARRNLELAFPTMSQSEIDAFVLENFKNTGAALIETGITWFWPTWRFKRILI 117
           R GK     A  NL L FP  S++E +A V E F     A+            + +  + 
Sbjct: 57  RLGKSSRRRALINLSLCFPERSEAEREAIVDEMFATAPQAMAMMAELAIRGPEKIQPRVD 116

Query: 118 DKDTQAIRQHAKTGQGVLLCCVHALNLEITARAFAVLGIGGYGVYRPHSNPAYEFIQYRG 177
            +  + I +  +  + V+    H   ++I A   A  G     ++    NP ++++    
Sbjct: 117 WQGLEIIEEMRRNNEKVIFLVPHGWAVDIPAMLMASQGQKMAAMFHNQGNPVFDYVWNTV 176

Query: 178 RTRNGNQLINRTD-IKQMIRVLRQGERLFYLPDQDYGHNKSVFVPFFAVEEACTTTGTSI 236
           R R G +L  R D IK  I+ +RQG   +YLPDQD+G   S FV FFA  +A       +
Sbjct: 177 RRRFGGRLHARNDGIKPFIQSVRQGYWGYYLPDQDHGPEHSEFVDFFATYKATLPAIGRL 236

Query: 237 LAYTSHCAIVIGSGFRNAQGRYEIMADKSIEADYPQKDETAAAAYMNKFVEEIILRAPEQ 296
           +       + +   +     R  I     ++ D  + D+   A  MN+ VE  +   PEQ
Sbjct: 237 MKVCRARVVPLFPIYDGKTHRLTIQVRPPMD-DLLEADDHTIARRMNEEVEIFVGPRPEQ 295

Query: 297 WMWLHKRFKS 306
           + W+ K  K+
Sbjct: 296 YTWILKLLKT 305