Pairwise Alignments

Query, 238 a.a., ribonuclease PH from Vibrio cholerae E7946 ATCC 55056

Subject, 703 a.a., polyribonucleotide nucleotidyltransferase from Rhodanobacter sp000427505 FW510-R12

 Score = 63.2 bits (152), Expect = 1e-14
 Identities = 64/234 (27%), Positives = 100/234 (42%), Gaps = 30/234 (12%)

Query: 2   RPDNRAADQVRPIKITRHYTAYAEGSVLVEFGNTKVLCNASIEEGVPRWL----KGQGKG 57
           R D R  D+VRPI I  H      GS +   G T+ +  A++  G    L    +G+ K 
Sbjct: 316 RIDGRRLDEVRPIHIDVHNLPRPHGSAMFTRGETQAIVTATLGTGRDAQLIDAAEGESKE 375

Query: 58  WVTAEYGMLPRATHSRTRREATNGKQGG---RTMEIQRLIARSLRAVVDLEAMGEIMITV 114
                Y   P             G  GG   R +   RL  R L+AV+        ++ V
Sbjct: 376 LFMLHYNFPPYCV-------GEAGFMGGPKRREIGHGRLAKRGLKAVLPSFDDFPYVLRV 428

Query: 115 DCDVIQADGGTRTASITGASVALADAFAHLIAKGQLKKNPMKGHVAAVSVGILGED---- 170
             ++ +++G +  AS+ G S+AL DA             P+K  VA +++G++ E     
Sbjct: 429 VSEITESNGSSSMASVCGGSLALMDAGV-----------PLKAPVAGIAMGLVKEGFRHA 477

Query: 171 VLCDLEYVEDSAADTDMNVVMTEEGKMIEIQGTAEGEPFSHEQLLELLAVAKKG 224
           VL D+   ED   D D  V  T  G +  +Q   + +  + E + E LA A++G
Sbjct: 478 VLTDILGDEDHLGDMDFKVAGT-RGGVSALQMDIKIDGITEEIMREALAQARQG 530



 Score = 34.7 bits (78), Expect = 5e-06
 Identities = 35/158 (22%), Positives = 65/158 (41%), Gaps = 23/158 (14%)

Query: 82  KQGGRTME----IQRLIARSLRAVVDLEAMGEIMITVDCDVIQADGGTRTASITGASVAL 137
           K+ GR  E    + RLI R +R +   E + E+ +      +  +  +   ++ GAS AL
Sbjct: 78  KREGRLTEKETLVSRLIDRPIRPLFPKEFLHEVQVVATVMSLNPEVDSDIPALIGASAAL 137

Query: 138 ADAFAHLIAKGQLKKNPMKGHVAAVSVGILGEDVLCDLEYVEDSAADTDMNVVMTEEG-K 196
           A           L   P  G + A  VG  G + + +    E   ++ D+ V  T +   
Sbjct: 138 A-----------LSGVPFAGPIGAARVGYCGGEFVLNPTQTELRTSELDLVVAGTSKAVL 186

Query: 197 MIEIQGTAEGE-------PFSHEQLLELLAVAKKGIAD 227
           M+E + +   E        F H  +  ++A  ++ +A+
Sbjct: 187 MVESEASLLSEGIMLSAVMFGHRAMQPVIAAIRELVAE 224