Pairwise Alignments

Query, 238 a.a., ribonuclease PH from Vibrio cholerae E7946 ATCC 55056

Subject, 701 a.a., polyribonucleotide nucleotidyltransferase from Rhodanobacter sp000427505 FW510-R12

 Score = 47.4 bits (111), Expect = 8e-10
 Identities = 58/234 (24%), Positives = 97/234 (41%), Gaps = 28/234 (11%)

Query: 1   MRPDNRAADQVRPIKITRHYTAYAEGSVLVEFGNTKVLCNASIEEGVPRWLK------GQ 54
           +R D R  D VR I           GS L   G T+ L   ++  G  R  +      G+
Sbjct: 315 VRIDGRQLDDVRAITARVGVLPRTHGSALFTRGETQALVVVTL--GTTRDAQIIDAPGGE 372

Query: 55  GKGWVTAEYGMLPRATHSRTRREATNGKQGGRTMEIQRLIARSLRAVVDLEAMGEIMITV 114
            K      Y   P +     R  A   ++ G      RL  R ++AV         ++ V
Sbjct: 373 SKDPFLFHYNFPPFSVGEAGRFGAPKRREIGHG----RLAKRGVQAVKPGIEEFPYVVRV 428

Query: 115 DCDVIQADGGTRTASITGASVALADAFAHLIAKGQLKKNPMKGHVAAVSVGILGED---- 170
             ++ +++G +  AS+ G+S+A+ DA             P+K  VA +++G++ E     
Sbjct: 429 VSEITESNGSSSMASVCGSSLAMMDAGV-----------PLKAPVAGIAMGLVKEGSDFV 477

Query: 171 VLCDLEYVEDSAADTDMNVVMTEEGKMIEIQGTAEGEPFSHEQLLELLAVAKKG 224
           VL D+   ED   D D  V  + +G +  +Q   + +  + E +   LA AK+G
Sbjct: 478 VLSDILGDEDHLGDMDFKVAGSADG-ISALQMDIKIDGITEEIMKVALAQAKRG 530



 Score = 33.9 bits (76), Expect = 9e-06
 Identities = 51/218 (23%), Positives = 84/218 (38%), Gaps = 35/218 (16%)

Query: 24  AEGSVLVEFGNTKVLCNASIEEGVPRWLKGQGKGWVTAEYGMLPRATHSRTRREATNGKQ 83
           A G+V+V  G T VL  A       +  +GQ    +T +Y       +S  R      K+
Sbjct: 26  ASGAVMVSMGGTVVLVTA---VAAAKQKEGQDFFPLTVDY---VEKFYSAGRIPGGFFKR 79

Query: 84  GGRTME----IQRLIARSLRAVVDLEAMGEIMITVDCDVIQADGGTRTASITGASVALAD 139
            GR  E      RLI R +R +   +   E+ +      +  +      ++ GAS AL+ 
Sbjct: 80  EGRPTEKETLTSRLIDRPVRPLFPDDFKNEVQVIAQVVSLNPEIDGDIPALIGASAALS- 138

Query: 140 AFAHLIAKGQLKKNPMKGHVAAVSVGILGEDVLCDLEYVEDSAADTDMNVVMTEEGKMIE 199
                     L   P KG + A  VG  G   L +    E   +  D+ VV    G ++ 
Sbjct: 139 ----------LAGIPFKGPIGAARVGYAGGKYLLNPSATELKTSQLDL-VVAGTAGAVLM 187

Query: 200 IQGTAE---------GEPFSHEQLLELLAVAKKGIADI 228
           ++  A+            F H+Q    + +A + IA++
Sbjct: 188 VESEAQLLSEDVMLGAVMFGHQQ----MQIAIRAIAEL 221