Pairwise Alignments

Query, 238 a.a., ribonuclease PH from Vibrio cholerae E7946 ATCC 55056

Subject, 771 a.a., Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) from Sphingobium sp. HT1-2

 Score = 52.8 bits (125), Expect = 2e-11
 Identities = 60/243 (24%), Positives = 100/243 (41%), Gaps = 24/243 (9%)

Query: 2   RPDNRAADQVRPIKITRHYTAYAEGSVLVEFGNTKVLCNASI----EEGVPRWLKGQGKG 57
           R D R   Q+RPI+    +     GS L   G T+ +C  ++     E +   L G    
Sbjct: 316 RIDGRTTTQIRPIEAMVGFLPRTHGSALFTRGETQAICTTTLGTKDAEQMIDGLTGLHYE 375

Query: 58  WVTAEYGMLPRATHSRTRREATNGKQGGRTMEIQRLIARSLRAVVDLEAMGEIMITVDCD 117
                Y   P +     R     G  G R +   +L  R+L  V+  +      I V  D
Sbjct: 376 NFMLHYNFPPYSVGEVGR----FGAPGRREVGHGKLAWRALHPVLPTKDEFPYTIRVLSD 431

Query: 118 VIQADGGTRTASITGASVALADAFAHLIAKGQLKKNPMKGHVAAVSVGIL--GED--VLC 173
           + +++G +  A++ G S+++ DA             P+K  V+ +++G++  G D  V+ 
Sbjct: 432 ITESNGSSSMATVCGGSLSMMDAGV-----------PLKRPVSGIAMGLILEGSDFAVIS 480

Query: 174 DLEYVEDSAADTDMNVVMTEEGKMIEIQGTAEGEPFSHEQLLELLAVAKKGIADIVAVQK 233
           D+   ED   D D  V  TE G +  +Q   +    + E     L  AK+G A I+    
Sbjct: 481 DILGDEDHLGDMDFKVAGTEAG-ITTMQMDIKVAGITQEIFETALRQAKEGRAHILGEMN 539

Query: 234 ASL 236
            +L
Sbjct: 540 KAL 542



 Score = 29.6 bits (65), Expect = 2e-04
 Identities = 46/213 (21%), Positives = 75/213 (35%), Gaps = 30/213 (14%)

Query: 24  AEGSVLVEFGNTKVLCNASIEEGVPRWLKGQGKGWVTAEY-------GMLPRATHSRTRR 76
           A+ +VL  +G T VLC  +  + V    +GQ    +T  Y       G +P     R R 
Sbjct: 27  ADAAVLATYGETVVLCAVTAAKSVK---EGQDFFPLTVHYQEKYSAAGRIPGGFFKRER- 82

Query: 77  EATNGKQGGRTMEIQRLIARSLRAVVDLEAMGEIMITVDCDVIQADGGTRTASITGASVA 136
               G     T+ + RLI R +R +       EI +         +      ++  AS A
Sbjct: 83  ----GATEKETL-VSRLIDRPIRPLFPEGFYNEINVIAQVMSFDGESEPDIVAMIAASAA 137

Query: 137 LADAFAHLIAKGQLKKNPMKGHVAAVSVGILGEDVLCDLEYVEDSAADTDMNVVMTEEGK 196
           L            L   P  G + A  VG    +   +    E    + D+ V  T    
Sbjct: 138 LT-----------LSGVPFMGPIGAARVGYKDGEYQLNPSLDEVKTGELDLVVAATSNAV 186

Query: 197 MIEIQGTAEGEPFSHEQLLELLAVAKKGIADIV 229
           M+     +E +  S + +L  +  A +    +V
Sbjct: 187 MMV---ESEAKELSEDVMLGAVLFAHEASKKVV 216