Pairwise Alignments

Query, 238 a.a., ribonuclease PH from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., polyribonucleotide nucleotidyltransferase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 56.2 bits (134), Expect = 2e-12
 Identities = 54/229 (23%), Positives = 96/229 (41%), Gaps = 18/229 (7%)

Query: 2   RPDNRAADQVRPIKITRHYTAYAEGSVLVEFGNTKVLCNASIEEGVPRWLKGQGKGWVTA 61
           R D R  D++RPI    +Y     GS +   G T+ L   ++   +   +        T 
Sbjct: 319 RLDGRQLDEIRPIWSEVNYLPATHGSAVFTRGETQSLTTVTLGTKLDEQMIDSAMVSGTN 378

Query: 62  EYGMLPRATHSRTRREATNGKQGGRTMEIQRLIARSLRAVVDLEAMGEIMITVDCDVIQA 121
           ++ +        T     N   G R +    L  R+L+ V+  EA     I +  D++++
Sbjct: 379 KFLLHYNFPAFSTGEVRPNRGPGRREVGHGNLALRALKKVLPPEAENPYTIRIVSDILES 438

Query: 122 DGGTRTASITGASVALADAFAHLIAKGQLKKNPMKGHVAAVSVGILGED------VLCDL 175
           +G +  A++   S+AL DA             P+K  V+ +++G++ ++      VL D+
Sbjct: 439 NGSSSMATVCAGSLALMDAGV-----------PVKAAVSGIAMGLITDEKTGKFAVLSDI 487

Query: 176 EYVEDSAADTDMNVVMTEEGKMIEIQGTAEGEPFSHEQLLELLAVAKKG 224
              ED   D D  V  T +G +   Q   + +  S+E L + L  A  G
Sbjct: 488 LGDEDHLGDMDFKVAGTNKG-ITACQMDIKVQGLSYEVLSQALQQANAG 535



 Score = 35.8 bits (81), Expect = 2e-06
 Identities = 55/208 (26%), Positives = 88/208 (42%), Gaps = 39/208 (18%)

Query: 24  AEGSVLVEFGNTKVLC----NASIEEGV---PRWLKGQGKGWVTAEYGMLPRATHSRTRR 76
           A+GSV+V+ GNT +L     N    EGV   P  +  Q K    A  G +P       RR
Sbjct: 29  ADGSVVVKMGNTMLLAAVVSNKEAREGVDFLPLSVDYQEK---FASSGKIPGGF---LRR 82

Query: 77  EATNGKQGGRTMEIQRLIARSLRAVVDLEAMGEIMITVDCDVIQADGGTRTASITGASVA 136
           EA   +     + + RL+ R LR +   +   E  +T+  ++I AD           +  
Sbjct: 83  EA---RLSDYEVLVSRLVDRVLRPLFPSDYHAETQMTI--NLISAD-----------TEI 126

Query: 137 LADAFAHLIAKGQLKKN--PMKGHVAAVSVGILGEDVLCDLEYVEDSAADTDMNV----- 189
           + DA A L A   L  +  P  G ++ V V  +   ++ +    +   AD ++ V     
Sbjct: 127 MPDALAALAASAALAVSDIPFNGPISEVRVARVDGQLVINPSVSDIQRADIELMVGASID 186

Query: 190 -VMTEEGKMIEIQGT--AEGEPFSHEQL 214
            V+  EG+M E+      E   F+HE +
Sbjct: 187 SVVMVEGEMNEVSEAEMLEAIQFAHEAI 214