Pairwise Alignments

Query, 238 a.a., ribonuclease PH from Vibrio cholerae E7946 ATCC 55056

Subject, 720 a.a., polyribonucleotide nucleotidyltransferase from Magnetospirillum magneticum AMB-1

 Score = 51.2 bits (121), Expect = 5e-11
 Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 23/203 (11%)

Query: 1   MRPDNRAADQVRPIKITRHYTAYAEGSVLVEFGNTKVLCNASI----EEGVPRWLKGQGK 56
           +R D R    VR I++       A GS L   G T+ L  A++    +E +   L G+ +
Sbjct: 315 VRIDGRDTKTVRAIEVEVGVLPRAHGSALFTRGETQALVVATLGTGQDEQIIDQLAGEYR 374

Query: 57  GWVTAEYGMLPRATHSRTRREATNGKQGGRTMEIQRLIARSLRAVVDLEAMGEIMITVDC 116
                 Y   P +     R     G  G R +   +L  R++R  +  +      + V  
Sbjct: 375 EHFMLHYNFPPYSVGEAGRM----GSPGRREIGHGKLAWRAMRPCLPAKESFPYTMRVVS 430

Query: 117 DVIQADGGTRTASITGASVALADAFAHLIAKGQLKKNPMKGHVAAVSVGILGED----VL 172
           ++ +++G +  AS+ G+S+AL DA             P+   VA +++G++ E     VL
Sbjct: 431 EITESNGSSSMASVCGSSLALMDAGV-----------PLPKPVAGIAMGLIKEGTDFAVL 479

Query: 173 CDLEYVEDSAADTDMNVVMTEEG 195
            D+   ED   D D  V  T +G
Sbjct: 480 SDILGDEDHLGDMDFKVAGTVDG 502



 Score = 32.0 bits (71), Expect = 3e-05
 Identities = 43/184 (23%), Positives = 72/184 (39%), Gaps = 31/184 (16%)

Query: 24  AEGSVLVEFGNTKVLCNA----SIEEGV---PRWLKGQGKGWVTAEYGMLPRATHSRTRR 76
           A+G+V+V +G T VLC      S + G+   P  +  Q K +     G +P     R   
Sbjct: 29  ADGAVMVTYGETSVLCTVVGAKSQKPGIDFFPLTVNYQEKAFAA---GKIPGGFFKR--- 82

Query: 77  EATNGKQGGRTMEIQRLIARSLRAVVDLEAMGEIMITVDCDVIQAD--GGTRTASITGAS 134
               G+   +   + RLI R +R +       E+ +   C V+  D       A++ G S
Sbjct: 83  ---EGRPSEKETLVSRLIDRPIRPLFADGFRNEVQVV--CTVLSHDLENDPDIAALVGTS 137

Query: 135 VALADAFAHLIAKGQLKKNPMKGHVAAVSVGILGEDVLCDLEYVEDSAADTDMNVVMTEE 194
            AL            +   P  G V A  VG +    + +    +   ++ D+ V  T E
Sbjct: 138 AALT-----------ISGLPFMGPVGAARVGYVDGAYVLNPLVGDLPKSELDLVVAGTVE 186

Query: 195 GKMI 198
           G ++
Sbjct: 187 GVLM 190