Pairwise Alignments

Query, 238 a.a., ribonuclease PH from Vibrio cholerae E7946 ATCC 55056

Subject, 721 a.a., Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 47.8 bits (112), Expect = 6e-10
 Identities = 61/249 (24%), Positives = 100/249 (40%), Gaps = 36/249 (14%)

Query: 2   RPDNRAADQVRPIKITRHYTAYAEGSVLVEFGNTKVLCNASI----EEGVPRWLKGQGKG 57
           R D R  D +R + +         GS L   G T+ L  A++    +  V   L G+   
Sbjct: 325 RIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTARDAQVLDELMGERTD 384

Query: 58  WVTAEYGMLPRATH------SRTRREATNGKQGGRTMEIQRLIARSLRAVVDLEAMGEIM 111
                Y   P +        S  RRE  +G          RL  R + AV+         
Sbjct: 385 SFLFHYNFPPYSVGETGMVGSPKRREIGHG----------RLAKRGVLAVMPDMDKFPYT 434

Query: 112 ITVDCDVIQADGGTRTASITGASVALADAFAHLIAKGQLKKNPMKGHVAAVSVGILGED- 170
           + V  ++ +++G +  AS+ GAS+AL DA             P+K  VA +++G++ E  
Sbjct: 435 VRVVSEITESNGSSSMASVCGASLALMDAGV-----------PIKAAVAGIAMGLVKEGD 483

Query: 171 ---VLCDLEYVEDSAADTDMNVVMTEEGKMIEIQGTAEGEPFSHEQLLELLAVAKKGIAD 227
              VL D+   ED   D D  V  + +G +  +Q   + E  + E +   L  AK     
Sbjct: 484 NYVVLSDILGDEDHLGDMDFKVAGSRDG-ISALQMDIKIEGITKEIMQVALNQAKGARLH 542

Query: 228 IVAVQKASL 236
           I+ V + ++
Sbjct: 543 ILGVMEQAI 551