Pairwise Alignments
Query, 238 a.a., ribonuclease PH from Vibrio cholerae E7946 ATCC 55056
Subject, 744 a.a., polyribonucleotide nucleotidyltransferase from Brevundimonas sp. GW460-12-10-14-LB2
Score = 49.7 bits (117), Expect = 2e-10
Identities = 53/199 (26%), Positives = 82/199 (41%), Gaps = 16/199 (8%)
Query: 2 RPDNRAADQVRPIKITRHYTAYAEGSVLVEFGNTKVLCNASIEEGVPRW----LKGQGKG 57
R D RA D+VR I GS L G T+ L A++ G L+G K
Sbjct: 317 RVDGRALDKVRAIVSEVGVLPRTHGSALFTRGETQALVVATLGTGEDEQYIDSLQGTYKE 376
Query: 58 WVTAEYGMLPRATHSRTRREATNGKQGGRTMEIQRLIARSLRAVVDLEAMGEIMITVDCD 117
Y P + R G G R + +L R++R ++ + I + +
Sbjct: 377 NFLLHYNFPPYSVGEAGRM----GSPGRREIGHGKLAWRAIRPMLPTKEDFPYTIRLVSE 432
Query: 118 VIQADGGTRTASITGASVALADAFAHLIAKGQLKKNPMKGHVAAVSVGILGE-DVLCDLE 176
+ +++G + A++ G+S+AL DA LI P+ G + + GE +L D+
Sbjct: 433 ITESNGSSSMATVCGSSLALMDAGVPLI-------RPVSGIAMGLILEPSGEFAILSDIL 485
Query: 177 YVEDSAADTDMNVVMTEEG 195
ED D D V T EG
Sbjct: 486 GDEDHLGDMDFKVAGTSEG 504
Score = 35.8 bits (81), Expect = 2e-06
Identities = 48/226 (21%), Positives = 84/226 (37%), Gaps = 31/226 (13%)
Query: 12 RPIKI-TRHYTAYAEGSVLVEFGNTKVLCNASIEEG-------VPRWLKGQGKGWVTAEY 63
RP+ + T A+G+VL +G T VL P + Q K T
Sbjct: 14 RPLTLETGRIARQADGAVLATYGETVVLATVVYGRAPKPGLDFFPLTVNYQEK---TFAA 70
Query: 64 GMLPRATHSRTRREATNGKQGGRTMEIQRLIARSLRAVVDLEAMGEIMITVDCDVIQADG 123
G +P R G+ + + RLI R +R + E + V +
Sbjct: 71 GKIPGGYFKR------EGRPSEKETLVSRLIDRPIRPLFVKGFKNETQVVVTVLQHDMEN 124
Query: 124 GTRTASITGASVALADAFAHLIAKGQLKKNPMKGHVAAVSVGILGEDVLCDLEYVEDSAA 183
+ AS AL + P G + A VG++ +++ + ++
Sbjct: 125 DPDVLGMVAASAALT-----------ISGVPFMGPIGAARVGLIDGELVLNPAIDLIPSS 173
Query: 184 DTDMNVVMTEEGKMIEIQGTAEGEPFSHEQLLELLAVAKKGIADIV 229
D D+ V T++ M+ +E + S E++LE L A G+ ++
Sbjct: 174 DLDLVVAGTQDALMMV---ESEAKELSEEKMLEALMFAHAGMQPVI 216