Pairwise Alignments

Query, 481 a.a., PTS N-acetylmuramic acid EIIBC component from Vibrio cholerae E7946 ATCC 55056

Subject, 480 a.a., trehalose PTS system, EII-BC components TreB (from data) from Pseudomonas simiae WCS417

 Score =  170 bits (431), Expect = 9e-47
 Identities = 132/484 (27%), Positives = 240/484 (49%), Gaps = 45/484 (9%)

Query: 7   TMMAQVLSLVGGSGNVAKCGNCMTRLRLTLNNSALADHAALKKISGVMGVVESDAQLQII 66
           T+  ++L  +GGS N+ +  +C+TRLRL L + +L + +AL ++  V G   +    Q++
Sbjct: 7   TIAREILENLGGSDNLEQAAHCVTRLRLALKDPSLVNSSALNQVDLVKGSFFTGGLFQVV 66

Query: 67  LGPGKAQTAADMMNALIESGDNVAPAVSEADLSTIAAQQKKQMKSKQTSAVQRFLSKFAT 126
           +GPG+     + + A +     +A A       TIA  +KK   + +T+A+QR +  F+ 
Sbjct: 67  IGPGE----VEKVYAALREQTGLAAA-------TIADVKKK--GADKTNAMQRLVRVFSD 113

Query: 127 IFTPLIPGFIAAGLLLGIATLL--EQIYVVGQTPSEFM--LD-LVAYLKVFGKGLFAFLS 181
           +F P++P  I AGLL+G+  L+  + +++ G+T  E    LD L + + +     F FL 
Sbjct: 114 VFMPILPALIIAGLLMGVNNLMGAQGMFIEGKTLLEAYPNLDGLWSLINLMANTSFVFLP 173

Query: 182 ILIGYNAQQAFGGSGVNGAILASLFV---------LGYDPEATKGIYSGMSEFFGF---- 228
            L+G++A + FGGS + G +L  + V          G       G      + FG+    
Sbjct: 174 ALVGWSAAKRFGGSEILGIVLGLMLVHPDLLNAWNYGKAVAGLDGQSLPYFDIFGWFKIE 233

Query: 229 AIDPRGNIIGVLLAAILGAQVERKVREYMPDDLDMILTSVVTLLIMGAVTFLIIMPIGGE 288
            +  +G I+ +L+AA + + +E+ +R  +P+ + +++  + T+++ G +   II P+   
Sbjct: 234 KVGYQGQILPILMAAYVMSVIEKGLRARVPNAIQLLVVPITTIVVTGVLALAIIGPVTRH 293

Query: 289 LFKGMSWLFLNLND--NPLGAAILAGLFLISVVFGIHQGFVPVYFALMEAQGFNSLFPIL 346
           L   ++   + L D    +G AI   L+   V+ G+H  F+ V   L+  QG   ++P++
Sbjct: 294 LGILITEGVVTLFDLAPMVGGAIFGLLYAPLVITGMHHMFLAVDLQLISTQGGTFIWPMI 353

Query: 347 AMAGAGQVGASLALYARAKKETTIRTQIKGAIIPGILGIGEPLIYGVTLPRVKPFVTACI 406
            M+   Q  A+LA++   +     ++    + I    GI EP ++GV L    PF  A +
Sbjct: 354 VMSNLAQGSAALAVFYTTRNARD-KSMASTSAISAYFGITEPAMFGVNLRFKFPFYAALV 412

Query: 407 GGAAGGFFIGLISYLGLPVGLNTVFGPSGVVAIPLMTSADGIFAGMAVFVGGLLISYTVG 466
           G A G  F+ L       +G   V G  G ++I        +   +AVFV G++I+  V 
Sbjct: 413 GSALGSIFLALNKVQASAIG---VGGLPGFISI--------VPQSIAVFVIGMVIAMVVP 461

Query: 467 FAAT 470
           F  T
Sbjct: 462 FVLT 465