Pairwise Alignments

Query, 481 a.a., PTS N-acetylmuramic acid EIIBC component from Vibrio cholerae E7946 ATCC 55056

Subject, 456 a.a., PTS sucrose transporter subunit IIBC from Serratia liquefaciens MT49

 Score =  189 bits (479), Expect = 2e-52
 Identities = 146/479 (30%), Positives = 231/479 (48%), Gaps = 53/479 (11%)

Query: 4   ITQTMMAQVLSLVGGSGNVAKCGNCMTRLRLTLNNSALADHAALKKISGVMGVVESDAQL 63
           IT T  A +L L+GG  N+A   +C TRLRL L + +  D  A+ K+ GV G   +  Q+
Sbjct: 3   ITATANA-LLPLLGGKENIASAAHCATRLRLVLVDDSKVDKVAIGKLDGVKGCFSNAGQI 61

Query: 64  QIILGPGKAQTAADMMNALIESGDNVAPAVSEADLSTIAAQQKKQMKSKQTSAVQRFLSK 123
           Q+I G G       ++N +       A  +  A +S  +  +   + +K+ + +QR    
Sbjct: 62  QVIFGTG-------LVNKV------HAEFIKAAGVSESSKSEAADIAAKKLNPLQRIARL 108

Query: 124 FATIFTPLIPGFIAAGLLLGIATLLEQIYVVGQTPSEFMLDLVAYLKVFGKGLFAFLSIL 183
            + IF P+IP  +A+GLL+G+  +++         + F++     L +F    F  L IL
Sbjct: 109 LSNIFVPIIPAIVASGLLMGLLGMVKTYGWADANSALFVM-----LDMFSSAAFIILPIL 163

Query: 184 IGYNAQQAFGGSGVNGAILASLFVLGYDPEATK--GIYSGM--SEFFGF---AIDPRGNI 236
           IG+ A + FGG+   GA L  +      P  T   G+  G    +FFG     I  +G +
Sbjct: 164 IGFTAAREFGGNPYLGATLGGILT---HPALTNAWGVAGGFHTMDFFGLEIAMIGYQGTV 220

Query: 237 IGVLLAAILGAQVERKVREYMPDDLDMILTSVVTLLIMGAVTFLIIMPIGGELFKGMSWL 296
             VLL     + +E+++R+ +P+ LD+ILT  +T++I G V  L I P G  L   +S++
Sbjct: 221 FPVLLTVWFMSVLEKQLRKVIPNALDLILTPFLTVVISGFVAMLFIGPAGRALGDSISFV 280

Query: 297 FLNLNDNP--LGAAILAGLFLISVVFGIHQGFVPVYFALMEAQ--GFNSLFPILAMAGAG 352
              L  +       +  GL+   V+ GIH  F  V   L+     G N L PI +MA   
Sbjct: 281 LSTLITHAGWFAGLLFGGLYSAIVITGIHHSFHAVEAGLLGNPNIGVNFLLPIWSMANIA 340

Query: 353 QVGASLALYARAKKETTIRTQIKGAIIPGILGIGEPLIYGVTLPRVKPFVTACIGGAAGG 412
           Q GA LA+Y +  ++  I+     +    +LGI E  ++G+ L  VKPF+ A  GGA GG
Sbjct: 341 QGGACLAVYFKT-RDAKIKAIAVPSAFSAMLGITEAALFGINLRFVKPFLAALAGGALGG 399

Query: 413 FFIGLISYLGLPVGLNTVFGPSGVVAIPLMTSADGIFAGMAVFVGGLLISYTVGFAATY 471
            ++     +   VG+N V    G+ AIP          GMA+     L+SY +G    +
Sbjct: 400 AWV-----VANHVGMNAV----GLTAIP----------GMAIVQASSLVSYIIGLVIAF 439