Pairwise Alignments

Query, 481 a.a., PTS N-acetylmuramic acid EIIBC component from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., PTS transporter subunit EIIC from Dickeya dianthicola ME23

 Score =  186 bits (473), Expect = 2e-51
 Identities = 135/453 (29%), Positives = 221/453 (48%), Gaps = 44/453 (9%)

Query: 6   QTMMAQVLSLVGGSGNVAKCGNCMTRLRLTLNNSALADHAALKKISGVMGVVESDAQLQI 65
           Q     +++LVGG GN+ +  +C+TRLR  L+ +   D A L+ + GV+G+  +  Q Q+
Sbjct: 6   QETAKNIVALVGGEGNIRQVFHCITRLRFYLHEAQRIDRAQLEALDGVIGINVAGEQFQV 65

Query: 66  ILGPGKAQTAADMMNALIESGDNVAPAVSEADLSTIAAQQKKQMKSKQTSAVQRFLSKFA 125
           I+G       AD+  ALI     +A   ++A               +    V   L  F+
Sbjct: 66  IIG----NEVADVYRALIRQYPQLASQPADA-----------PQAGRPRHPVSALLEAFS 110

Query: 126 TIFTPLIPGFIAAGLLLGIATLLEQIYVVGQTPSEFMLDLVAYLKVFGKGLFAFLSILIG 185
           +IF+P+IP    AG+L GI +LL  ++ V  T   +++     L     G+F F+ +++ 
Sbjct: 111 SIFSPVIPAIAGAGILKGILSLLVALHWVSNTNQTYLI-----LSAISDGIFYFMPLVLA 165

Query: 186 YNAQQAFGGSGVNGAILASLFVLGYDPEATKGIYSGMSE--FFGFAIDP---RGNIIGVL 240
           ++A   FGG+      LA+  +    P   K +++G  E  F G  + P     ++I +L
Sbjct: 166 FSAAHQFGGNPYVAVALAATLL---HPTLMK-LFAGGGEISFLGLPVSPVSYASSVIPIL 221

Query: 241 LAAILGAQVERKVREYMPDDLDMILTSVVTLLIMGAVTFLIIMP----IGGELFKGMSWL 296
           LA  L + VER+V   MP  L  +   ++TLLI+  V  + I P    +G  L  G+ WL
Sbjct: 222 LAVWLMSWVERRVDRIMPGALKTMFVPLLTLLIVAPVMLIAIGPLGILVGNHLSSGIVWL 281

Query: 297 FLNLNDNPLGAAILAGLFLISVVFGIHQGFVPVYFALMEAQGFNSLFPILAMAGAGQVGA 356
             N+    L   IL G   + ++ G+H   +P+    +   GF+    I  +A  GQ GA
Sbjct: 282 VDNM--GILAGLILGGTLSMIIITGMHYVLIPIMINNISRMGFDPFKIIFYIANMGQAGA 339

Query: 357 SLALYARAKKETTIRTQIKGAIIPGILGIGEPLIYGVTLPRVKPFVTACIGGAAGG---F 413
           +  ++ RA+ + T ++      +   +GI EP +YGV +   +PF  A IGGA GG    
Sbjct: 340 AFGVFLRARDKKT-KSLALSTSLTATMGITEPAMYGVNIRFKRPFAAALIGGACGGAFAM 398

Query: 414 FIGLISYL----GLPVGLNTVFGPSGVVAIPLM 442
           F G+ +Y     GLP GL  + GP+ + A+  M
Sbjct: 399 FFGVKTYAFALSGLP-GLPALVGPTFLYALASM 430