Pairwise Alignments

Query, 282 a.a., MurR/RpiR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 287 a.a., DNA-binding transcriptional regulator from Pseudomonas putida KT2440

 Score =  104 bits (260), Expect = 2e-27
 Identities = 72/281 (25%), Positives = 128/281 (45%), Gaps = 5/281 (1%)

Query: 2   SVLQRIVSRRTQLSESGRQIGDWVLANAAQAAAMTSQDLAAWANVSQSSIVKFTQRLGFK 61
           ++L++I  R  +L+++ R++ + +L N  QA   +   LA  A VS+ ++ +F +  G  
Sbjct: 3   NLLEQIQGRLDELNKAERKVAEVILLNPQQATRFSIAALAQAAKVSEPTVNRFCRSFGVS 62

Query: 62  GYSEFKLALTEELGRKQVMVNQPLHSNILADDPVAVIAQKLVQTKTEAMFHTTNALRLDE 121
           GY E KL L + L      V++ +     ADD  A   QK+  +   ++      L   +
Sbjct: 63  GYPELKLQLAQSLASGAAYVSRAVE----ADDDPAAYTQKIFASAIASLDSACQQLDPQQ 118

Query: 122 FSEAISWIQQAVRVQIIGIGGSALVAKDLAFKLLKLGITALTEQDSHVQIATARTLHSQD 181
            S A+  + QA ++   G+G SA VA D   K  +  +      D  +Q   A   H+ D
Sbjct: 119 VSRAVDMMIQARQIHFFGLGASAPVALDAQHKFFRFNLAVSAHADVLMQRMLASVAHTGD 178

Query: 182 VLIAISFSGEKREILIAAEAAKQQGAKVIALTTPNKNRLREIADLALDTIADETQHRSSA 241
           + + IS++G  RE++  A  A++ GA V+ LT    + L     L+L     E       
Sbjct: 179 LFVIISYTGRTRELVEVARLARENGASVLGLTAAG-SPLANACSLSLHIPLPEDTDIYMP 237

Query: 242 IASRTAQNVLTDLIFLTLTQQRETSARQLIDDISSDIRQMR 282
           + SR  Q  + D++   +T +R    +  +  I   +   R
Sbjct: 238 MTSRIIQLTVLDVLATGMTLRRGVDFQPHLRKIKESLNASR 278