Pairwise Alignments

Query, 653 a.a., Fe(3+)-hydroxamate ABC transporter permease FhuB from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  129 bits (325), Expect = 2e-34
 Identities = 85/273 (31%), Positives = 139/273 (50%), Gaps = 5/273 (1%)

Query: 379 WPLRWPRMLTALFAGVGLAIAGTLLQRLIYNPLASPDILGVSSGATFALVFASLFLGQSL 438
           W +R PRML     G GLA+ G +LQ +  NPLA P +LGV+SGAT   V   L +G+ +
Sbjct: 62  WLIRVPRMLLGALVGAGLALIGAVLQAVTRNPLADPHLLGVTSGATLGAVIVVLHVGEVI 121

Query: 439 QS-THWMTALLGSA-AVLVALLLLGRRHHYAPSSLILTGIAITALLEALVQFTLAKGTGD 496
              T  + A +G+  ++LV L +  R        L+L G+A++ ++ A     L  G   
Sbjct: 122 GLLTLPLAAFIGALLSMLVVLAVASRNGRLESDRLLLCGVAVSFVMMAAANLLLFMGDHR 181

Query: 497 SYQ-ILLWLSGSTYRATGEQ-ALLLSVGVVGLTLLALGLSRWLTLISIGRGFASARGLSA 554
           +   ++ W+ G    A  E  A+  +  ++GL LL LG++R L  +  G   A   GL+A
Sbjct: 182 AASAVMFWMLGGLGLARWELLAVPTATVLLGLGLL-LGMARPLNALMAGEQTAVTLGLNA 240

Query: 555 SRASLVLLILVALLCALVTATMGPVSFVGLIAPHMAMMLGAQRAPSQLLLAALVGGTLML 614
               L + ++ +L+  ++ +  G + FVGL+ PH+A  L        L +  L+G   ++
Sbjct: 241 RNVRLKVFLVASLMTGVLVSISGSIGFVGLMVPHIARRLVGAEHRRLLPVCVLLGSLFLV 300

Query: 615 WADWLGQALLFPAQIAAGTLVAIIGGSYFLLLL 647
           W D   + L+ P  +  G   A IGG +F+ L+
Sbjct: 301 WVDVAARTLIAPEDLPIGVATAAIGGLFFIGLM 333



 Score =  122 bits (306), Expect = 3e-32
 Identities = 102/333 (30%), Positives = 162/333 (48%), Gaps = 16/333 (4%)

Query: 4   LRLTGLGALTLLLALVSLQWGH-NLTLNEQWQLVLGHQAAQSFAQVNFIYAQ-------- 54
           L L  LGA+ L+  ++SL +G   + +   W++VL    A    +VN+   Q        
Sbjct: 8   LLLAALGAVLLVSCVLSLGFGPARVPVEVVWRIVL--YKAFGVGEVNWPAGQEHIVWLIR 65

Query: 55  LPRAVMAIVVGAVLGLVGSLMQQLTQNRLTSPLTLGTSSGAWLGLIIVNIWFSDWVADYS 114
           +PR ++  +VGA L L+G+++Q +T+N L  P  LG +SGA LG +IV +   + +   +
Sbjct: 66  VPRMLLGALVGAGLALIGAVLQAVTRNPLADPHLLGVTSGATLGAVIVVLHVGEVIGLLT 125

Query: 115 -ALAAMAGALLAFALIISIAGLR-NLTGLPLVVSGMVVNILLGSIATALVLLNEEFAQN- 171
             LAA  GALL+  +++++A     L    L++ G+ V+ ++ + A  L+ + +  A + 
Sbjct: 126 LPLAAFIGALLSMLVVLAVASRNGRLESDRLLLCGVAVSFVMMAAANLLLFMGDHRAASA 185

Query: 172 VFMWGAGDLAQNGWEWLTWLLPRLALVFPLLLFAPRVLTLLRLGHEGAAARGLAVLPAFL 231
           V  W  G L    WE L      + L   LLL   R L  L  G + A   GL      L
Sbjct: 186 VMFWMLGGLGLARWELLAVPTATVLLGLGLLLGMARPLNALMAGEQTAVTLGLNARNVRL 245

Query: 232 FLMAGGIWLVSASITAVGVIGFIGLLTPNIARSLGARTTKMELYSSALLGALLLLATDML 291
            +      +    ++  G IGF+GL+ P+IAR L     +  L    LLG+L L+  D+ 
Sbjct: 246 KVFLVASLMTGVLVSISGSIGFVGLMVPHIARRLVGAEHRRLLPVCVLLGSLFLVWVDVA 305

Query: 292 AMGLSVWAEEVVPSGITAAVIGAPALIWFSRRQ 324
           A  L   A E +P G+  A IG    I   RR+
Sbjct: 306 ARTLI--APEDLPIGVATAAIGGLFFIGLMRRR 336