Pairwise Alignments

Query, 653 a.a., Fe(3+)-hydroxamate ABC transporter permease FhuB from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  123 bits (309), Expect = 1e-32
 Identities = 96/281 (34%), Positives = 144/281 (51%), Gaps = 12/281 (4%)

Query: 379 WPLRWPRMLTALFAGVGLAIAGTLLQRLIYNPLASPDILGVSSGA-TFALVFASLFLGQS 437
           W  R  R L A   G GLA  G +LQ L+ NPLA P +LG+S+GA T A++ A + +G  
Sbjct: 55  WNYRLTRALVAAACGAGLATCGVILQSLLRNPLADPYLLGISAGASTGAVLVALIGVGGG 114

Query: 438 LQSTHWMTALLGSAAVLVALLLLGRRHHYAPSS--LILTGIAITALLEALVQFTLAKGTG 495
           L S     A +G+ A    ++LL R    A  +  +IL GIA + L  AL  F + K   
Sbjct: 115 LISLS-AGAFVGAMAAFALVILLARASGSASGTGQIILAGIAGSQLFNALTAFLITKSAS 173

Query: 496 DSYQ--ILLWLSGSTYRATGEQA-LLLSVGVVGLTLLALGLSRWLTLISIGRGFASARGL 552
                 IL WL G+          L + V V GL +  L   R L   + G   A++ G+
Sbjct: 174 SEQARGILFWLLGNLSGVRWPSVWLAVPVAVAGLAV-CLWHRRALDAFTFGSDSAASLGI 232

Query: 553 SASRASLVLLILVALLCALVTATMGPVSFVGLIAPH-MAMMLGAQRAPSQLLLAALVGGT 611
              R   VL+   AL+ A++ + +G + FVGL+ PH + ++LG     S+LL A+ +GG 
Sbjct: 233 PVRRVQFVLVGCAALVTAVMVSIVGSIGFVGLVIPHAVRLLLGT--GHSRLLPASALGGA 290

Query: 612 L-MLWADWLGQALLFPAQIAAGTLVAIIGGSYFLLLLLSQR 651
           L ++ AD L + L+    I  G + A++G   F L+L+ +R
Sbjct: 291 LFLIAADVLSRTLIKGQVIPVGVVTALVGAPVFALILIGRR 331



 Score =  110 bits (276), Expect = 8e-29
 Identities = 88/278 (31%), Positives = 140/278 (50%), Gaps = 12/278 (4%)

Query: 54  QLPRAVMAIVVGAVLGLVGSLMQQLTQNRLTSPLTLGTSSGAWLGLIIVN-IWFSDWVAD 112
           +L RA++A   GA L   G ++Q L +N L  P  LG S+GA  G ++V  I     +  
Sbjct: 58  RLTRALVAAACGAGLATCGVILQSLLRNPLADPYLLGISAGASTGAVLVALIGVGGGLIS 117

Query: 113 YSALAAMAGALLAFALIISIA---GLRNLTGLPLVVSGMVVNILLGSIATALVL--LNEE 167
            SA  A  GA+ AFAL+I +A   G  + TG  ++++G+  + L  ++   L+    + E
Sbjct: 118 LSA-GAFVGAMAAFALVILLARASGSASGTG-QIILAGIAGSQLFNALTAFLITKSASSE 175

Query: 168 FAQNVFMWGAGDLAQNGWEWLTWLLPRLALVFPLLLFAPRVLTLLRLGHEGAAARGLAVL 227
            A+ +  W  G+L+   W  +   +P       + L+  R L     G + AA+ G+ V 
Sbjct: 176 QARGILFWLLGNLSGVRWPSVWLAVPVAVAGLAVCLWHRRALDAFTFGSDSAASLGIPVR 235

Query: 228 PAFLFLMAGGIWLVSASITAVGVIGFIGLLTPNIARSLGARTTKMELYSSALLGALLLLA 287
                L+     + +  ++ VG IGF+GL+ P+  R L        L +SAL GAL L+A
Sbjct: 236 RVQFVLVGCAALVTAVMVSIVGSIGFVGLVIPHAVRLLLGTGHSRLLPASALGGALFLIA 295

Query: 288 TDMLAMGLSVWAEEVVPSGITAAVIGAP--ALIWFSRR 323
            D+L+  L     +V+P G+  A++GAP  ALI   RR
Sbjct: 296 ADVLSRTLI--KGQVIPVGVVTALVGAPVFALILIGRR 331