Pairwise Alignments

Query, 653 a.a., Fe(3+)-hydroxamate ABC transporter permease FhuB from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., iron ABC transporter permease from Pseudomonas sp. SVBP6

 Score =  140 bits (352), Expect = 1e-37
 Identities = 93/286 (32%), Positives = 147/286 (51%), Gaps = 6/286 (2%)

Query: 367 ESASWALPSE-FQWPLRWPRMLTALFAGVGLAIAGTLLQRLIYNPLASPDILGVSSGATF 425
           E+ +W+   E   W +R PRML A   G GLA+ G +LQ +  NPLA P +LGV+SGAT 
Sbjct: 53  EAPAWSTGQEHIVWLIRVPRMLLAALVGGGLAMIGAVLQAVTRNPLADPHLLGVTSGATL 112

Query: 426 ALVFASLFLGQSLQS-THWMTALLGSAAVLVALLLLGRRHHYAPSS-LILTGIAITALLE 483
             V   L +G+ L   T  + A +G+   ++ +L +  RH    S  L+L G+A+  ++ 
Sbjct: 113 GAVLVVLHIGELLGVLTLPLAAFIGALCSMLLVLAIASRHGRLDSDRLLLCGVAVAFVMM 172

Query: 484 ALVQFTLAKGTGD-SYQILLWLSGSTYRATGEQALLLSVGVV-GLTLLALGLSRWLTLIS 541
           A     L  G    S  ++ W+ G    A  E   + ++ V+ GL LL LG++R L  + 
Sbjct: 173 AAANLLLFLGDHRASSAVMFWMLGGLGLARWELLPIPAISVLLGLALL-LGMARSLNALM 231

Query: 542 IGRGFASARGLSASRASLVLLILVALLCALVTATMGPVSFVGLIAPHMAMMLGAQRAPSQ 601
            G   A   GL+A +  L+  ++ +LL  ++ A  G + FVGL+ PH+A  L        
Sbjct: 232 AGEQTAVTLGLNARKVRLLAFLICSLLTGVLVAISGSIGFVGLMVPHIARRLVGAEHSRL 291

Query: 602 LLLAALVGGTLMLWADWLGQALLFPAQIAAGTLVAIIGGSYFLLLL 647
           L +  L+G   ++W D   + L+ P  +  G   A IGG +F+ L+
Sbjct: 292 LPVCLLLGSLFLIWVDVAARTLISPEDLPIGIATAAIGGLFFIGLM 337



 Score =  120 bits (300), Expect = 1e-31
 Identities = 104/333 (31%), Positives = 159/333 (47%), Gaps = 14/333 (4%)

Query: 4   LRLTGLGALTLLLALVSLQWGHN-LTLNEQWQLVL-------GHQAAQSFAQVNFIYA-Q 54
           L L GL AL L+  +VSL +G   + +   W+++L       G   A S  Q + ++  +
Sbjct: 10  LLLLGLFALLLVSCVVSLGFGSAPVPVEVVWRVLLFKLFGVTGEAPAWSTGQEHIVWLIR 69

Query: 55  LPRAVMAIVVGAVLGLVGSLMQQLTQNRLTSPLTLGTSSGAWLGLIIVNIWFSDWVADYS 114
           +PR ++A +VG  L ++G+++Q +T+N L  P  LG +SGA LG ++V +   + +   +
Sbjct: 70  VPRMLLAALVGGGLAMIGAVLQAVTRNPLADPHLLGVTSGATLGAVLVVLHIGELLGVLT 129

Query: 115 -ALAAMAGALLAFALIISIAGLR-NLTGLPLVVSGMVVNILLGSIATALVLLNEEFAQN- 171
             LAA  GAL +  L+++IA     L    L++ G+ V  ++ + A  L+ L +  A + 
Sbjct: 130 LPLAAFIGALCSMLLVLAIASRHGRLDSDRLLLCGVAVAFVMMAAANLLLFLGDHRASSA 189

Query: 172 VFMWGAGDLAQNGWEWLTWLLPRLALVFPLLLFAPRVLTLLRLGHEGAAARGLAVLPAFL 231
           V  W  G L    WE L      + L   LLL   R L  L  G + A   GL      L
Sbjct: 190 VMFWMLGGLGLARWELLPIPAISVLLGLALLLGMARSLNALMAGEQTAVTLGLNARKVRL 249

Query: 232 FLMAGGIWLVSASITAVGVIGFIGLLTPNIARSLGARTTKMELYSSALLGALLLLATDML 291
                   L    +   G IGF+GL+ P+IAR L        L    LLG+L L+  D+ 
Sbjct: 250 LAFLICSLLTGVLVAISGSIGFVGLMVPHIARRLVGAEHSRLLPVCLLLGSLFLIWVDVA 309

Query: 292 AMGLSVWAEEVVPSGITAAVIGAPALIWFSRRQ 324
           A  L   + E +P GI  A IG    I   RR+
Sbjct: 310 ARTLI--SPEDLPIGIATAAIGGLFFIGLMRRR 340