Pairwise Alignments

Query, 653 a.a., Fe(3+)-hydroxamate ABC transporter permease FhuB from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., iron ABC transporter permease from Pectobacterium carotovorum WPP14

 Score =  162 bits (410), Expect = 2e-44
 Identities = 98/273 (35%), Positives = 149/273 (54%), Gaps = 2/273 (0%)

Query: 381 LRWPRMLTALFAGVGLAIAGTLLQRLIYNPLASPDILGVSSGATFALVFASLFLGQSLQS 440
           LR PR L AL  G  LAI+G +LQ ++ NPLASPDILG++SGA+ A VF   FL  ++  
Sbjct: 70  LRLPRALLALLVGGALAISGLILQSIVRNPLASPDILGITSGASAAAVFFLSFLATAISQ 129

Query: 441 THWMTALLGSAAVL-VALLLLGRRHHYAPSSLILTGIAITALLEALVQFTLA-KGTGDSY 498
                A +G A +  VA+ LL  +   +P  L+L G+ ++A++ A V   L     G + 
Sbjct: 130 RWLPVAAMGGAWITAVAIYLLAWKQGASPLRLVLVGVGLSAIMGAAVTMMLVFSPIGTTL 189

Query: 499 QILLWLSGSTYRATGEQALLLSVGVVGLTLLALGLSRWLTLISIGRGFASARGLSASRAS 558
              +WL+GS Y A  +    L+  ++      +GL+R + +  +    A   G S  R  
Sbjct: 190 TAYVWLTGSIYGAQWQHVSALAGWLLLGAPFLVGLARHVNVHELDDALACGVGQSVGRIR 249

Query: 559 LVLLILVALLCALVTATMGPVSFVGLIAPHMAMMLGAQRAPSQLLLAALVGGTLMLWADW 618
           L LL L   L     A  G ++FVGL+APH+A  L ++  P   L++AL GG L++ AD 
Sbjct: 250 LALLTLSVALAGAAIAYAGAMAFVGLLAPHIAKKLASRSFPGLALVSALTGGLLVMVADL 309

Query: 619 LGQALLFPAQIAAGTLVAIIGGSYFLLLLLSQR 651
           +G+    P  + AG  ++++G  +F+ LLL QR
Sbjct: 310 IGRTAFLPLDLPAGIFISVLGTPFFIYLLLRQR 342



 Score =  111 bits (278), Expect = 5e-29
 Identities = 92/327 (28%), Positives = 165/327 (50%), Gaps = 10/327 (3%)

Query: 5   RLTGLGALTLLLALVSLQWGHNLTLNE---QWQLVLGHQAAQSFAQVNFIY--AQLPRAV 59
           R T   AL LLL L+++ +  +L+L E       V+     ++   V+FI    +LPRA+
Sbjct: 18  RRTSAVALPLLLVLLAVVF-LSLSLGEVVLSPAQVMSGLLGKADRGVHFIVNDLRLPRAL 76

Query: 60  MAIVVGAVLGLVGSLMQQLTQNRLTSPLTLGTSSGAWLGLIIVNIWFSDWVAD-YSALAA 118
           +A++VG  L + G ++Q + +N L SP  LG +SGA    +    + +  ++  +  +AA
Sbjct: 77  LALLVGGALAISGLILQSIVRNPLASPDILGITSGASAAAVFFLSFLATAISQRWLPVAA 136

Query: 119 MAGALLAFALIISIAGLRNLTGLPLVVSGMVVNILLGSIATALVLLNE-EFAQNVFMWGA 177
           M GA +    I  +A  +  + L LV+ G+ ++ ++G+  T +++ +        ++W  
Sbjct: 137 MGGAWITAVAIYLLAWKQGASPLRLVLVGVGLSAIMGAAVTMMLVFSPIGTTLTAYVWLT 196

Query: 178 GDLAQNGWEWLTWLLPRLALVFPLLLFAPRVLTLLRLGHEGAAARGLAVLPAFLFLMAGG 237
           G +    W+ ++ L   L L  P L+   R + +  L    A   G +V    L L+   
Sbjct: 197 GSIYGAQWQHVSALAGWLLLGAPFLVGLARHVNVHELDDALACGVGQSVGRIRLALLTLS 256

Query: 238 IWLVSASITAVGVIGFIGLLTPNIARSLGARTTKMELYSSALLGALLLLATDMLAMGLSV 297
           + L  A+I   G + F+GLL P+IA+ L +R+       SAL G LL++  D++  G + 
Sbjct: 257 VALAGAAIAYAGAMAFVGLLAPHIAKKLASRSFPGLALVSALTGGLLVMVADLI--GRTA 314

Query: 298 WAEEVVPSGITAAVIGAPALIWFSRRQ 324
           +    +P+GI  +V+G P  I+   RQ
Sbjct: 315 FLPLDLPAGIFISVLGTPFFIYLLLRQ 341



 Score = 25.8 bits (55), Expect = 0.003
 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 5/64 (7%)

Query: 582 VGLIAPHMAMMLGAQRAPSQLLLAALVGGTLMLWADWLGQALLFPAQIAAGTLVAIIGGS 641
           VG ++  +     A   P  L+L A+V  +L L     G+ +L PAQ+ +G L     G 
Sbjct: 9   VGRVSRQIDRRTSAVALPLLLVLLAVVFLSLSL-----GEVVLSPAQVMSGLLGKADRGV 63

Query: 642 YFLL 645
           +F++
Sbjct: 64  HFIV 67